Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1863 |
Symbol | |
ID | 6284191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2091982 |
End bp | 2092788 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642621426 |
Product | hypothetical protein |
Protein accession | YP_001895495 |
Protein GI | 187923853 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00500964 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0941942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGC AAAACCTGAG TCTATGGGAT GTTGCGATTG CCGCGTTGCT GATCGTCGTG AACGGTGTCG TGTCGGTGGC GCTCAAGCTC GATCTCGAGC GCAAGCTGGC GTGGGCCGCC GTGCGCACCA TCGTACAGTT GCTGGCGATC GGTTACGTGC TCGGCTGGGT GTTCCGTTAC GACCGCTGGT ACGTGGTGTT GCCGTTGATG ATCGTGATGA CGCTGATCGC CGGTTTCGCG GGCGCGCAAC GCGGCAACCG CACCTACCGC GGACAACGCG CGGACAGTGT GCTGTCGATC TGGGTCAGTT CGTGGCTGGT GGCCGCAGTC GGGCTGTTCG TCGTGATCCG CATTCACCCG TGGTACGAGC CGCAATATGC GATTCCGATT CTCGGCATGA TCCTCGGCAA TACGCTGACC GGCGTGTCGC TCGGCATCGA ACGGATGACC GAGGAATTGA CCGCGCGGCG CGACCGCGTC GACATGGCGC TCGCGCTCGG CGCGACGCGC TGGGAGGCGG CCCAGGCGCC CGCGCGCCAG GCGGTGCGGG CGGGCATGAT GCCGACGCTC AATCAGATGG CGGTGGTCGG CGTGGTGAGC CTGCCCGGCA TGATGACCGG CCAGGTGCTG GCCGGGCAAT CGCCGTTGCA GGCCGTGCGC TACCAGATCG TGATCATGTT CCTGATAGCC GCGTCGTCGG CGCTGGGGAC CGTGGGCGCG GTGCTGCTCA CCTACCGGCG GCTCTTTTCC GCCGAGCACC GGTTTCTGTC GGCGCGGCTC GTGGAGCGGA CCGCGGCGCG GCGTTGA
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Protein sequence | MTLQNLSLWD VAIAALLIVV NGVVSVALKL DLERKLAWAA VRTIVQLLAI GYVLGWVFRY DRWYVVLPLM IVMTLIAGFA GAQRGNRTYR GQRADSVLSI WVSSWLVAAV GLFVVIRIHP WYEPQYAIPI LGMILGNTLT GVSLGIERMT EELTARRDRV DMALALGATR WEAAQAPARQ AVRAGMMPTL NQMAVVGVVS LPGMMTGQVL AGQSPLQAVR YQIVIMFLIA ASSALGTVGA VLLTYRRLFS AEHRFLSARL VERTAARR
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