Gene Bphyt_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1863 
Symbol 
ID6284191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2091982 
End bp2092788 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID642621426 
Producthypothetical protein 
Protein accessionYP_001895495 
Protein GI187923853 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00500964 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0941942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGC AAAACCTGAG TCTATGGGAT GTTGCGATTG CCGCGTTGCT GATCGTCGTG 
AACGGTGTCG TGTCGGTGGC GCTCAAGCTC GATCTCGAGC GCAAGCTGGC GTGGGCCGCC
GTGCGCACCA TCGTACAGTT GCTGGCGATC GGTTACGTGC TCGGCTGGGT GTTCCGTTAC
GACCGCTGGT ACGTGGTGTT GCCGTTGATG ATCGTGATGA CGCTGATCGC CGGTTTCGCG
GGCGCGCAAC GCGGCAACCG CACCTACCGC GGACAACGCG CGGACAGTGT GCTGTCGATC
TGGGTCAGTT CGTGGCTGGT GGCCGCAGTC GGGCTGTTCG TCGTGATCCG CATTCACCCG
TGGTACGAGC CGCAATATGC GATTCCGATT CTCGGCATGA TCCTCGGCAA TACGCTGACC
GGCGTGTCGC TCGGCATCGA ACGGATGACC GAGGAATTGA CCGCGCGGCG CGACCGCGTC
GACATGGCGC TCGCGCTCGG CGCGACGCGC TGGGAGGCGG CCCAGGCGCC CGCGCGCCAG
GCGGTGCGGG CGGGCATGAT GCCGACGCTC AATCAGATGG CGGTGGTCGG CGTGGTGAGC
CTGCCCGGCA TGATGACCGG CCAGGTGCTG GCCGGGCAAT CGCCGTTGCA GGCCGTGCGC
TACCAGATCG TGATCATGTT CCTGATAGCC GCGTCGTCGG CGCTGGGGAC CGTGGGCGCG
GTGCTGCTCA CCTACCGGCG GCTCTTTTCC GCCGAGCACC GGTTTCTGTC GGCGCGGCTC
GTGGAGCGGA CCGCGGCGCG GCGTTGA
 
Protein sequence
MTLQNLSLWD VAIAALLIVV NGVVSVALKL DLERKLAWAA VRTIVQLLAI GYVLGWVFRY 
DRWYVVLPLM IVMTLIAGFA GAQRGNRTYR GQRADSVLSI WVSSWLVAAV GLFVVIRIHP
WYEPQYAIPI LGMILGNTLT GVSLGIERMT EELTARRDRV DMALALGATR WEAAQAPARQ
AVRAGMMPTL NQMAVVGVVS LPGMMTGQVL AGQSPLQAVR YQIVIMFLIA ASSALGTVGA
VLLTYRRLFS AEHRFLSARL VERTAARR