Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1845 |
Symbol | |
ID | 6281778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2072517 |
End bp | 2073257 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621408 |
Product | acetyacetyl-CoA reductase |
Protein accession | YP_001895477 |
Protein GI | 187923835 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.142964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGC GAATTGCGTA CGTAACGGGC GGGATGGGTG GCATCGGCAC GAGCATTTGC CAGCGGCTGC ACAAAGAGGG CTACAAGGTC GTCGCGGGCT GCGGCCCGAA CTCGCCGCGC CGCGTGAAGT GGCTCGAAGA GCAGAAAGCG CTGGGCTTCG ATTTTGTCGC GTCCGAAGGC AACGTCGGCG ACTGGGAATC GACCAAGAGC GCGTTCGACA AGGTCAAGGC CGAAGTCGGC GAGATCGACA TTCTGGTGAA CAACGCCGGC ATTACGCGCG ACGTCGTGTT TCGCAAGATG ACGCATGAAG ATTGGACGGC GGTGATCGAC ACCAACCTGA CCAGCCTCTT CAACGTCACC AAGCAGGTGA TCGACGGCAT GGTCGAGCGT GGCTTTGGCC GCATCATCAA CATTTCGTCG GTGAACGGCC AGAAGGGCCA GTTCGGCCAG ACCAACTATT CGACCGCGAA GGCCGGCATT CACGGCTTCA CGATGTCGCT GGCGCAGGAA GTGGCCACCA AGGGCGTGAC GGTCAACACC GTGTCGCCGG GCTACATCGG CACGGATATG GTCAAGTCGA TCCGCCCCGA CGTGCTGGAA AAAATCGTCG CGACGATTCC GGTGCGCCGT CTCGGCCAGC CGGACGAAAT CGGCTCGATC GTGGCATGGC TGGCATCGGA TGAATCGGGT TTCTCCACGG GCGCTGATTT TTCGCTGAAC GGCGGTTTGC ATATGGGCTG A
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Protein sequence | MTQRIAYVTG GMGGIGTSIC QRLHKEGYKV VAGCGPNSPR RVKWLEEQKA LGFDFVASEG NVGDWESTKS AFDKVKAEVG EIDILVNNAG ITRDVVFRKM THEDWTAVID TNLTSLFNVT KQVIDGMVER GFGRIINISS VNGQKGQFGQ TNYSTAKAGI HGFTMSLAQE VATKGVTVNT VSPGYIGTDM VKSIRPDVLE KIVATIPVRR LGQPDEIGSI VAWLASDESG FSTGADFSLN GGLHMG
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