| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1840 |
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| Symbol | |
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| ID | 6281479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2065490 |
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| End bp | 2066350 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621403 |
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| Product | outer membrane assembly lipoprotein YfiO |
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| Protein accession | YP_001895472 |
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| Protein GI | 187923830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0444128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.143398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCCT TGAACACCAT CACTAAAGCG GCGATCAATT TGGCGGCCAT CAAGAAGGCG
GCCCGGAAAG TGGCCGGATA CATTGCGTGC GCCGCAGCCG TCGCCGTTGT CGCGGCTTGC
CACGGCCTGC CGGAAAAGAC CGACGAGACG GCAACGTGGA ACAACAACAA ATTATATACG
GAGGCGAACG ACGCCCTGAG CGGTGGTGAC TTCGGCAAGT GCGCCAAGTA CTTCGAAATG
CTCGAGGGTC GCGATCCGTT CGGCCACTTC GCCCAGCAGG CGCAGATCAA CGTCGCGTAC
TGCAACTGGA AAGACAACGA AAACGCCGCC GCCGACCAGG CTATCGACCG CTTCATCCAG
CTGCATCCGG ATCATCCGGA CATCGCTTAC GCGTACTACC TGAAGGGCAT GATTCACTTC
AACGACGACC TCGGTCTGTT CGGCCGCTTT TCCGGCCAGG ACATGAGCGA ACGCGATCCG
AAGTCGCTGC GCGAGTCGTA CGACGCGTTC AAGGTCGTGG TGGACAAATA TCCGAACAGC
AAGTATGCGC CGGACGCCGC GCAGCGCATG CGCTATATCG TGAACGCGCT GGCGTCACAC
GAAGTCCATG CGGCGGATTA CTACTACCGC CGTGGCGCCT ATGTCGCCGC AATCAATCGC
GCGCAACTGG CGCTTACGCA ATACAAGAAC GCACCGGCTA TCGAAGACGC ACTGCACATC
ATGATGCTGT CGTATGAGAA GCTGAACCAG CCGCAACTGG CCGACGACAC GAAGCGCGTG
CTGGCCGGCA CCTTCCCCGA CAGCCCGTAC ATCACGGGTC ATGCACGGCC GGGAACGGAA
AAGTCGTGGT GGCAGTTCTA A
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| Protein sequence | MRALNTITKA AINLAAIKKA ARKVAGYIAC AAAVAVVAAC HGLPEKTDET ATWNNNKLYT
EANDALSGGD FGKCAKYFEM LEGRDPFGHF AQQAQINVAY CNWKDNENAA ADQAIDRFIQ
LHPDHPDIAY AYYLKGMIHF NDDLGLFGRF SGQDMSERDP KSLRESYDAF KVVVDKYPNS
KYAPDAAQRM RYIVNALASH EVHAADYYYR RGAYVAAINR AQLALTQYKN APAIEDALHI
MMLSYEKLNQ PQLADDTKRV LAGTFPDSPY ITGHARPGTE KSWWQF
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