| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1837 |
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| Symbol | |
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| ID | 6281476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2061845 |
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| End bp | 2062927 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642621400 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_001895469 |
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| Protein GI | 187923827 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0947163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.421634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGAAAT CGAAGCGCCG CCCGCCGCAA GCCGAGTCTG AGAAGACCAG CAACGCTATG
TCCGCTTCGG TCGACGAAAG CGGCGCTTCG GAAGTGGAAG AGGAGATCGC CGAGGAACGC
GATCTCGACG AACGCCAGGG CGGCGCTGAC GAAGCCGGCG AAACCCGTGA AAGCGCGAGC
GAAGCCGCGC CGGACGCGGA CGATTTCCGC GCGCTGCTGC AAGCCGAGCT GACGGCCGAC
ACGATTCAGC ACTACCTGAA CCGTATCAGC GTCAAGCCGC TTCTGACTGT TGAGGAAGAG
CAGAAATATT CGCGTCTTGC CAAGGCGGGC GAGTTCGAAG CGCGCCAGGT CATGATCGAA
CGCAATCTAC GGCTCGTCGT CAGTATCGCA AAGGGCTATC TGAATCGCGG CGTGCCACTG
CTCGATCTGA TCGAAGAGGG CAATCTCGGC TTGATGCACG CCATCGAGAA ATTCGATCCG
ACGCGCGGCT TCCGGTTTTC TACTTACGCC ACGTGGTGGA TTCGCCAGAG TATCGAGCGC
GCCATCATGA ATCAGGCACG CACTGTCCGT TTGCCGGTGC ACGTGATTCG CGAGCTCAAT
CAGGTGCTGC GCGCCAAGCG CCATCTGGAA AAAAATTCGA TGAATTCGGG CGAGGCCGCC
GAGCGCCGCG ACGCCAGCAT CGACGACATC GCCTATCTGA CTGGCAAGAC CACCGACGAA
GTCACCGACA TCCTCGCGCT GAACGAACAT ACCGCGTCGC TCGACGCGCC GCTCGATCTC
GATCCGGCGA GCAGCCTGCT CGATCTGCTG TCCGACGACC AGAGCCAGTC GCCGGACGCC
GAAGTGCAGC ATCGCGAACT GGAAACGCTT ACACGCGCGT GGCTGGCGCG TCTGTCGGAC
AAGCATCGTC ATGTGATCGA GCGCCGCTTC GGCCTGAATC ACATCGAACC CGCCACGCTC
GAAGAACTCG CCGACGAAAT GGGCCTCACG CGCGAGCGTG TGCGCCAGAT CCAACAGGAA
GCGCTCGTGC GGTTGAAGCG CTTCTTCGCC TCCAACGGTG TTCGGAAAGA CGCCGTTCTA
TAA
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| Protein sequence | MPKSKRRPPQ AESEKTSNAM SASVDESGAS EVEEEIAEER DLDERQGGAD EAGETRESAS
EAAPDADDFR ALLQAELTAD TIQHYLNRIS VKPLLTVEEE QKYSRLAKAG EFEARQVMIE
RNLRLVVSIA KGYLNRGVPL LDLIEEGNLG LMHAIEKFDP TRGFRFSTYA TWWIRQSIER
AIMNQARTVR LPVHVIRELN QVLRAKRHLE KNSMNSGEAA ERRDASIDDI AYLTGKTTDE
VTDILALNEH TASLDAPLDL DPASSLLDLL SDDQSQSPDA EVQHRELETL TRAWLARLSD
KHRHVIERRF GLNHIEPATL EELADEMGLT RERVRQIQQE ALVRLKRFFA SNGVRKDAVL
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