| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1824 |
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| Symbol | rho |
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| ID | 6284032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2046634 |
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| End bp | 2047902 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642621387 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001895456 |
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| Protein GI | 187923814 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.025276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0977479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTTAT CCGAGCTTAA GACTCTGCAC GTGTCCGAAT TGATCGAGAT GGCCAATGGC
CTCGAGATCG AAAGTGCGAA CCGCCTGCGC AAGCAGGAAT TGATGTTCGC CATTCTAAAA
AAACGAGCCA AAACGGGCGA CACGATCTTC GGCGACGGCA CGCTCGAAGT GCTGCCGGAC
GGCTTCGGCT TCCTGCGTTC GCCGGAAACC TCGTACCTCG CCAGCACGGA TGATATTTAC
ATCAGCCCGT CGCAAATCCG CCGCTTCAAC CTGCATACGG GCGACACGAT CGAAGGCGAA
GTGCGTACGC CGAAAGACGG TGAACGTTAT TTCGCGCTGG TGAAGGTGGA CAAGGTCAAC
GGCCAGCCGC CGGAAGCCTC GAAGCACAAG ATCATGTTCG AAAATCTGAC GCCGCTGCAC
CCGAACAAGG TGCTGCTGCT CGAACGTGAA ATGCGTGGCG AGGAAAACGT CACGGGCCGC
ATCATCGACA TGATCGCGCC GATCGGCAAA GGCCAGCGCG GCCTGCTGGT TGCGTCGCCG
AAGTCCGGCA AGACCGTGAT GCTTCAGCAC ATCGCGCATG CAATCAAGCA GAACCATCCT
GATGTCGTGC TGTTCGTGCT GCTGATCGAC GAACGCCCGG AAGAAGTGAC CGAAATGCAG
CGTTCGGTGG CGGGCGAAGT GATCGCCTCC ACGTTCGACG AACCCGCCGC GCGTCACGTG
CAGGTCGCCG AAATGGTGAT CGAAAAAGCC AAGCGCCTCG TCGAAATGAA GAACGACGTG
GTGATTCTGC TGGACTCCAT TACGCGTCTC GCGCGAGCGT ACAACACGGT CGTGCCGGCT
TCGGGCAAGG TGCTCACCGG CGGTGTCGAC GCCAACGCGC TGCAACGTCC GAAGCGCTTC
TTCGGCGCGG CGCGCAATAT TGAGGAAGGC GGTTCGCTGA CCATCATCGG CACGGCGCTG
ATCGAAACCG GCAGCCGCAT GGACGACGTG ATCTACGAAG AATTCAAGGG CACCGGCAAT
ATGGAAGTGC ACCTTGAGCG CCGTCTTGCT GAAAAGCGCG TCTATCCGTC GATCAACTTG
AACAAGTCCG GCACGCGCCG TGAAGAACTG CTGATCAAGC CCGAAGTGCT GCAAAAGATC
TGGGTGCTGC GCAAGTTCAT TCACGACATG GACGAAGTCG AGTCGATGGA ATTCCTGCTC
GACAAGATCC GCCAGACGAA GAGCAACTCC GAGTTCTTCG ACATGATGCG TCGTGGCGGC
GGCAGCTAA
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| Protein sequence | MHLSELKTLH VSELIEMANG LEIESANRLR KQELMFAILK KRAKTGDTIF GDGTLEVLPD
GFGFLRSPET SYLASTDDIY ISPSQIRRFN LHTGDTIEGE VRTPKDGERY FALVKVDKVN
GQPPEASKHK IMFENLTPLH PNKVLLLERE MRGEENVTGR IIDMIAPIGK GQRGLLVASP
KSGKTVMLQH IAHAIKQNHP DVVLFVLLID ERPEEVTEMQ RSVAGEVIAS TFDEPAARHV
QVAEMVIEKA KRLVEMKNDV VILLDSITRL ARAYNTVVPA SGKVLTGGVD ANALQRPKRF
FGAARNIEEG GSLTIIGTAL IETGSRMDDV IYEEFKGTGN MEVHLERRLA EKRVYPSINL
NKSGTRREEL LIKPEVLQKI WVLRKFIHDM DEVESMEFLL DKIRQTKSNS EFFDMMRRGG
GS
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