Gene Bphyt_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1807 
Symbol 
ID6283235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2028495 
End bp2029946 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content64% 
IMG OID642621370 
Productthreonine synthase 
Protein accessionYP_001895439 
Protein GI187923797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0266942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00766231 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTACC TCTCAACGCG CGGCGCCGGA GCCGGCGAGC GCCACACCTT CTCCGACATC 
CTGCTGGGCG GTCTCGCGAA AGACGGCGGC CTGTATTTGC CCGCGGAATA TCCGCGTGTC
ACTGCTGACG AACTGACGCG CTGGCGCACG CTGCCGTACG CGGACCTCGC CTTCGAGATC
CTGTCGAAAT TCAGCGACGA CATTCCCGCC GACGACCTGC GCGCGCTCAC GCGCAAGACG
TACACGGCGG CCACGTACTG CAATGTTCGC GACGACGAAA GCGCCGCGCA GATCACGCCG
TTGAAGACGC TGGGCGTCGA GAACGGCGCG CCGCTGTCGC TGCTGGAACT GTCGAACGGT
CCGACGCTCG CGTTCAAGGA CATGGCGATG CAGTTGATCG GCAACCTGTT CGAATACGCG
CTCGCGAGAC ACGGCGAAAC GCTGAACATT CTCGGCGCGA CCTCGGGCGA CACCGGCAGC
GCCGCGGAAT ACGCGATGCG CGGCAAGCAC GGCATCAGCG TGTTCATGCT GTCGCCGCAC
AAGAAGATGA GCGCGTTCCA GACCGCGCAG ATGTACAGCC TGCAGGACCC GAACATCTTC
AACATCGCGG TTGAAGGCGT GTTCGACGAC GCGCAGGACA TCGTCAAAGC CGTCTCGAAC
GATCACGCGT TCAAGGCGAA GTACAAGATC GGCACGGTCA ACTCGATCAA CTGGGCGCGC
GTGGTGGCGC AGGTCGTGTA CTACTTCAAG GGCTACTTCG CGGCCACGAA GTCGAACGAC
GAGCGCGTGT CGTTCACGGT GCCGTCGGGC AACTTCGGCA ACGTGTGCGC GGGTCACATC
GCGCGCATGA TGGGCCTGCC GATCGAGAAG CTGGTCGTGG CGACGAACGA AAACGACGTG
CTCGACGAGT TCTTCCGCAC CGGCATTTAC CGCGTGCGCA AGGCGGCCGA GACGTATCAC
ACCAGCAGCC CGAGCATGGA TATTTCGAAG GCCTCGAACT TCGAGCGCTT CGTGTTCGAT
CTGCTCGGCC GCGATCCGGC GCGCGTGCTG CAATTGTTCC GCGACGTCGA AGAGAAGGGC
GGCTTCGACC TTGCGGCGAG CGGCGATTTC GCGCGCGTGA AGGAGTTCGG TTTCGTGTCC
GGTAGCAGCA CGCATGACAG CCGCGTGGAC ACGATCCGCG ACGTGTTCGA GCGTTACGAC
ACGATGATCG ACACGCACAC AGCCGACGGC CTGAAGGTGG CGCGCGAACA TCTGCAGCCC
GGCATTCCGA TGATCGTGCT GGAGACGGCG CAACCCATCA AGTTTGGCGA GACGATCCGC
GAAGCGCTGT TGCGCGAGCC GGAGCGGCCG GCGGCGTTCT CGGGCCTGGA GGCGCTGCCG
CAGCGTTTCG AAGTGCTGCC GGCGGACGTG CAGCGTGTGA AGGACTTCAT TGTGGCGAAC
GCGGGCGCGT AA
 
Protein sequence
MNYLSTRGAG AGERHTFSDI LLGGLAKDGG LYLPAEYPRV TADELTRWRT LPYADLAFEI 
LSKFSDDIPA DDLRALTRKT YTAATYCNVR DDESAAQITP LKTLGVENGA PLSLLELSNG
PTLAFKDMAM QLIGNLFEYA LARHGETLNI LGATSGDTGS AAEYAMRGKH GISVFMLSPH
KKMSAFQTAQ MYSLQDPNIF NIAVEGVFDD AQDIVKAVSN DHAFKAKYKI GTVNSINWAR
VVAQVVYYFK GYFAATKSND ERVSFTVPSG NFGNVCAGHI ARMMGLPIEK LVVATNENDV
LDEFFRTGIY RVRKAAETYH TSSPSMDISK ASNFERFVFD LLGRDPARVL QLFRDVEEKG
GFDLAASGDF ARVKEFGFVS GSSTHDSRVD TIRDVFERYD TMIDTHTADG LKVAREHLQP
GIPMIVLETA QPIKFGETIR EALLREPERP AAFSGLEALP QRFEVLPADV QRVKDFIVAN
AGA