Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1790 |
Symbol | |
ID | 6283572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2008491 |
End bp | 2009876 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621353 |
Product | replicative DNA helicase |
Protein accession | YP_001895422 |
Protein GI | 187923780 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0711961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC CGTCCAAAGA TCCCCAACTC GAGTCGCTGA AAGTCCCGCC GCATTCGATC GAGGCCGAGC AATCGGTGCT GGGCGGCCTG CTGCTCGACA ATGCCGCGTG GGACCGCATC GCCGATTTCC TGTCGCAGAG CGATTTTTAC CGCTACGACC ACCGCATCAT CTTCGAGCAC ATCGGCAAGC TGATCGCGGC CACGCGCCCG GCCGACGTGA TCACCGTCTA CGAGGCGCTC GGCACCTCGG GCAAGGCGGA GGAGGTTGGT GGTCTCGCCT ACCTGAACGC GCTGGCGCAG AACACGCCGA GCGCGGCCAA CATTCGCCGC TACGCGGAAA TCGTGCGCGA TCGCGCGGTG CTGCGCCGGC TGGTCTCGGT CGCCGACGAA ATCTCGGCCG ACGCCTTCAA TCCGCAAGGC AAGGAAGTCC GCCAGTTGCT GGATGAGGCT GAGTCCAAGG TGTTTTCGAT CGCCGAAGAC GGCGCGCGCG GCACGCAAGG CTTCCTCGAA ATCGGACCGC TGCTGACGGA AGTCGTCGAG CGGATCGATA CGCTGTATCA CACGGCCAAC CCGAGCGACG TGACCGGCAC GCCGACCGGC TTTGTCGATC TGGACCGCAT GACTTCGGGC ATGCACGGCG GCGAGCTGAT CATCGTCGCC GGCCGTCCGT CGATGGGTAA AACGGCGTTT TCGATGAACA TCGGCGAATA CGTGGCGGTC GAGTACGGCT TGCCGGTCGC GGTGTTCTCG ATGGAAATGC CGGGTTCGCA ACTCACCATG CGTATGCTTG GCTCGGTCGG ACGGCTGGAT CAGCACCGTA TGCGCACCGG GCGTCTGACG GACGAGGATT GGCCGAAGCT CACGCATGCC GTGCAGAAAA TGAGCGAGGC GCAGATTTTC ATCGACGAGA CCGGCGGTCT GAACCCGATG GAATTGCGCT CGCGCGCGCG CCGCTTGTCG CGCCAGTGCG GCAAGCTGGG GTTGATCATC ATCGATTATT TGCAGCTCAT GAGCGGATCG TCGTCAGGTG AAAACCGCGC CACCGAAATT TCGGAAATCT CGCGTTCGCT AAAGAGTCTC GCCAAGGAAC TCGACGTACC GGTGATCGCG TTGTCGCAGC TCAACCGGGG TCTCGAACAG CGCCCGAACA AGCGGCCGAT CATGTCGGAC TTGCGCGAAT CCGGCGCTAT CGAACAGGAT GCCGACGTGA TCCTGTTCAT TTACCGCGAC GAAGTGTACA ACCCGGACAG TCCGGACAAG GGCACGGCCG AAATCATCAT CGGTAAGCAG CGGAACGGTC CGATCGGCCC GGTTCGGCTC ACGTTCCATG GTCAATTCAC GAAGTTCGAC AACTTTGCCG GCGCGCAGAA TTTCTACAGC GACTAA
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Protein sequence | MNAPSKDPQL ESLKVPPHSI EAEQSVLGGL LLDNAAWDRI ADFLSQSDFY RYDHRIIFEH IGKLIAATRP ADVITVYEAL GTSGKAEEVG GLAYLNALAQ NTPSAANIRR YAEIVRDRAV LRRLVSVADE ISADAFNPQG KEVRQLLDEA ESKVFSIAED GARGTQGFLE IGPLLTEVVE RIDTLYHTAN PSDVTGTPTG FVDLDRMTSG MHGGELIIVA GRPSMGKTAF SMNIGEYVAV EYGLPVAVFS MEMPGSQLTM RMLGSVGRLD QHRMRTGRLT DEDWPKLTHA VQKMSEAQIF IDETGGLNPM ELRSRARRLS RQCGKLGLII IDYLQLMSGS SSGENRATEI SEISRSLKSL AKELDVPVIA LSQLNRGLEQ RPNKRPIMSD LRESGAIEQD ADVILFIYRD EVYNPDSPDK GTAEIIIGKQ RNGPIGPVRL TFHGQFTKFD NFAGAQNFYS D
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