| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1784 |
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| Symbol | |
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| ID | 6284630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2004910 |
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| End bp | 2005644 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621347 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001895416 |
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| Protein GI | 187923774 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.181738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.484528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCCAGA CCGATTCAGA ACCTGTCCGC GCGCACGGCG AGTCCGAAGC AGCGAGGAGC
CGGCGCTTTC AGCAGTTGGC GCTGCCGCAC CTCGATGCCG CGTACAACCT TGCGCGCTGG
TTGTGCGGCA ACGCGAGCGA TGCCGACGAT GTCGTGCAGG AAGCGTTCAT GCGCGCATTC
CGCTTCTTCG ACACATTTCG CGGCGACTCG GCGCGGCCGT GGCTGCTGGC AATCGTCCGG
CGCACCTGGT ACACGGAATG GCGACGACGT TCGTCGTCGC ACGAGACGGT GGAGTTCGAC
GACACCATGG ACGACGCCTC GTTCGACGGC TGGAGCGTCG GCGGCGCCGA TCCGCAGGCG
CTCCTGATCC GCGACGAGGA CACGAAGCGC GTGCATGAGG CGCTTGCGCA ACTGCCGGTC
GAATATCGGG AAGTGCTGAT GCTGCGGGAG CTGGAGGAAA TGGGTTACAA GGAGATCGCG
GCGGTGGCCG ACGTGCCGAT CGGCACGGTG ATGTCCCGGC TCGCGCGGGG GCGTCGCAAG
CTTGCCGCGT TGCTCGCGGA GAAACAGGGG GGCGCGACTG CCTCGCACAG GTCGTCGGCG
TGCGCGGCGT CCGGCCCGGG CAGATCGGCC ACGGCGAGCG TGACCCCATT GCGGGCGTCC
GCCAACGGCC GACCACTCAA CTCGCCAGGC GGCACCGCCG CCGGCAGCGC TCAGGAGACG
CCAGATGGAC TGTAA
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| Protein sequence | MVQTDSEPVR AHGESEAARS RRFQQLALPH LDAAYNLARW LCGNASDADD VVQEAFMRAF
RFFDTFRGDS ARPWLLAIVR RTWYTEWRRR SSSHETVEFD DTMDDASFDG WSVGGADPQA
LLIRDEDTKR VHEALAQLPV EYREVLMLRE LEEMGYKEIA AVADVPIGTV MSRLARGRRK
LAALLAEKQG GATASHRSSA CAASGPGRSA TASVTPLRAS ANGRPLNSPG GTAAGSAQET
PDGL
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