| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1772 |
|---|
| Symbol | |
|---|
| ID | 6280959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1991280 |
|---|
| End bp | 1991930 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642621335 |
|---|
| Product | LexA repressor |
|---|
| Protein accession | YP_001895404 |
|---|
| Protein GI | 187923762 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC TCACCGCACG ACAGCAGCAG GTTTTCGATC TGATCCGCAG GGCTATCGAA
CGCACCGGCT TTCCGCCCAC CCGCGCGGAG ATCGCCGCCG AACTGGGTTT CAGCTCGGCC
AACTCCGCAG AAGAACATCT GCGCGCGCTC GCTCGCAAGG GCGTGATCGA ACTCGCGGCC
GGCGCATCGC GCGGCATTCG CCTGCTGGCC GGTCCGGAAG ACTCGCCGCA CCAGTTCACC
CTGCCGCACG CCAGCATCAT GCAACTGTCG CTGCCGCTGA TCGGGCGCGT CGCCGCCGGC
AGCCCGATCC TCGCGCAGGA ACATATCTCG CAGCACTACG CCTGCGACCC GGCGCTGTTC
TCGAGCAAGC CGGATTACCT CCTGAAAGTG CGCGGGCTGT CCATGCGCGA CGCGGGCATC
TTCGACGGCG ACCTGCTCGC GGTGCAAAAG CGCAGCGAAG CGAAAGACGG CCAGATCATC
ATTGCCCGGC TCGGCGACGA CGTCACGGTC AAGCGCCTGA AGCGCCGGCC GAACGGGCTC
GAACTGATCG CCGAGAACCC CGATTACGAA AACATCTTCG TTGAAACCGG CAGTGCGGAA
TTCGCGCTGG AGGGCATCGC CGTGGGGCTC ATTCGCCCCG GCGAGTTCTA A
|
|---|
| Protein sequence | MTKLTARQQQ VFDLIRRAIE RTGFPPTRAE IAAELGFSSA NSAEEHLRAL ARKGVIELAA
GASRGIRLLA GPEDSPHQFT LPHASIMQLS LPLIGRVAAG SPILAQEHIS QHYACDPALF
SSKPDYLLKV RGLSMRDAGI FDGDLLAVQK RSEAKDGQII IARLGDDVTV KRLKRRPNGL
ELIAENPDYE NIFVETGSAE FALEGIAVGL IRPGEF
|
|---|
| |