Gene Bphyt_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1769 
Symbol 
ID6282168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1989448 
End bp1989912 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID642621332 
ProductUspA domain protein 
Protein accessionYP_001895401 
Protein GI187923759 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCT ACCAGAAAAT CCTGCTGTGC TACGACGGCT CGCGCGAAGG CCGCAAAGCA 
CTACGTTGCG GCGCCGACCT GGCGTTGGAT CTGAAAGCGG AAACGCATTT GCTGTCGGTG
GTCGACATGC GTTCGAGCAT TGCGCAAAGC GCGGGCCTGC TGACCGACGT GGCCTGCGGC
AGTTTCGAAA AGACCGCGCG CGATATTCTG CAGGAAGGCG TGGACTGGCT CACGGAGCGA
GGCGTGACAG CACAGGGGCA TTTCGCATTT GGCCATCCGA TCGATGAGAT CGCCAACCTC
GCCAATGAAC TGCATGTCGA TCTGGTAGTG GTCGGCCACC GGTGCCGCAC GGGTTTGTCA
CGATGGTGGA TGGGCGCGGG CAATACGCCG CTGCTCGACC GTGTTTCGTG CAGCATTCTG
GTGGCGTGTT CTTCGGCGCA GGAGCAGCAG CAAGCGGCGG CTTGA
 
Protein sequence
MASYQKILLC YDGSREGRKA LRCGADLALD LKAETHLLSV VDMRSSIAQS AGLLTDVACG 
SFEKTARDIL QEGVDWLTER GVTAQGHFAF GHPIDEIANL ANELHVDLVV VGHRCRTGLS
RWWMGAGNTP LLDRVSCSIL VACSSAQEQQ QAAA