Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1769 |
Symbol | |
ID | 6282168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1989448 |
End bp | 1989912 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621332 |
Product | UspA domain protein |
Protein accession | YP_001895401 |
Protein GI | 187923759 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCT ACCAGAAAAT CCTGCTGTGC TACGACGGCT CGCGCGAAGG CCGCAAAGCA CTACGTTGCG GCGCCGACCT GGCGTTGGAT CTGAAAGCGG AAACGCATTT GCTGTCGGTG GTCGACATGC GTTCGAGCAT TGCGCAAAGC GCGGGCCTGC TGACCGACGT GGCCTGCGGC AGTTTCGAAA AGACCGCGCG CGATATTCTG CAGGAAGGCG TGGACTGGCT CACGGAGCGA GGCGTGACAG CACAGGGGCA TTTCGCATTT GGCCATCCGA TCGATGAGAT CGCCAACCTC GCCAATGAAC TGCATGTCGA TCTGGTAGTG GTCGGCCACC GGTGCCGCAC GGGTTTGTCA CGATGGTGGA TGGGCGCGGG CAATACGCCG CTGCTCGACC GTGTTTCGTG CAGCATTCTG GTGGCGTGTT CTTCGGCGCA GGAGCAGCAG CAAGCGGCGG CTTGA
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Protein sequence | MASYQKILLC YDGSREGRKA LRCGADLALD LKAETHLLSV VDMRSSIAQS AGLLTDVACG SFEKTARDIL QEGVDWLTER GVTAQGHFAF GHPIDEIANL ANELHVDLVV VGHRCRTGLS RWWMGAGNTP LLDRVSCSIL VACSSAQEQQ QAAA
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