Gene Bphyt_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1742 
Symbol 
ID6281357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1967075 
End bp1968199 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content65% 
IMG OID642621304 
Product3-hydroxyisobutyryl-CoA hydrolase 
Protein accessionYP_001895374 
Protein GI187923732 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTT CCGCCTCGCC CGACGTCAGC GACGAAGTCG CGACTTACGT AGCCAACCGC 
ATCGGTTTCA TCGAACTGGA CAGGCCGAAG GCGCTCAATG CGCTGTCGAC CGGCATGATT
CGCGCGATGC ACGCGGCGCT CGACCAGTGG CGCGAAGATC CGGACGTGCT CGCCGTCGTG
GTGCGCAGCC GGCACCCGCG CGCGTTCTGC GCGGGCGGCG ACATCCGCTT TCTCTATGAG
TCGGCGCAGC GCGGCGAGCA CGATGCGCGC GACACGTTTT TCATCGAGGA ATACCGGCTC
AATCACGCGA TCTTCACCTT CCCGAAGCCG TATATCGCGC TGATGAACGG CGTGGTGATG
GGCGGCGGCA TGGGCATTTC GCAGGGTGCG CATCGCACAG GCGGTCTGCG AGTCGTCACG
AATTCGACGA AGATGGCGAT GCCTGAAACC CGCATCGGCC TGTTTCCCGA TGTCGGCGCG
GGTTGGTTTC TGGCTCGCAC GCCCGGCGCG ATCGGCCGTT ATCTCGCGGT GACCGGCGAA
ACGATCGGCG CGGCCGACGC GCTTTACGCA GGTCTTGCCG ACACCTACAT CGACGACGCG
GCCTTGCCCG CGCTGGTCGA CACCTTGCGC AGCGAGCCTT TCGAGCGTGG TGCGGACGTG
GTGGCGTGCA TTGAACGCGA GGCGCTCGCG CATCAGGTCG TGCCGCAACC GGAGGCCTCG
TCGCTGGCGC ACGGGCGTGC GTTGATCGAT CGTCACTTCG CGTTGCCCGA TGTCGCTCGC
ATTCTTGCCT CGCTCCAAAG CGAGCGCGAG GCCGCCGATT GGGCCGAACA GATGATTTCG
GTGTTGCGCG AACGTTCGCC GTTGTCGATG GCGGTGTCGC TGGAAGTGGT GACGCGCGCC
GAAGGTTCGA TGGCCGACGT GCTGCGTGGC GACCTCGATC TGACGCGCTC GAGCTTTCTG
CACGGCGACA CGATAGAAGG CATTCGCGCG CGCATCATCG ACAAGGACAA CGCGCCGCGC
TGGCGCTTTG CGCGCATCGA AGACGTGAAC GCCGCCGACG TCGAGAAGAT GTTCGAGAGC
CCGTGGCCGG CGAACGAGCA TCCGCTGCGC GATCTGCGCG GTTAA
 
Protein sequence
MSISASPDVS DEVATYVANR IGFIELDRPK ALNALSTGMI RAMHAALDQW REDPDVLAVV 
VRSRHPRAFC AGGDIRFLYE SAQRGEHDAR DTFFIEEYRL NHAIFTFPKP YIALMNGVVM
GGGMGISQGA HRTGGLRVVT NSTKMAMPET RIGLFPDVGA GWFLARTPGA IGRYLAVTGE
TIGAADALYA GLADTYIDDA ALPALVDTLR SEPFERGADV VACIEREALA HQVVPQPEAS
SLAHGRALID RHFALPDVAR ILASLQSERE AADWAEQMIS VLRERSPLSM AVSLEVVTRA
EGSMADVLRG DLDLTRSSFL HGDTIEGIRA RIIDKDNAPR WRFARIEDVN AADVEKMFES
PWPANEHPLR DLRG