Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1741 |
Symbol | |
ID | 6284545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1966105 |
End bp | 1967028 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642621303 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001895373 |
Protein GI | 187923731 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTCA TGGGAATCGC TGAACGAAAG AACCGCCAGA AGCAGGCACT GCGCGAACGC ATCCTCGATG CCGCGCGGCG CATCGTGATG CGCGAAGGCT TTGCCGCGTT GTCCATGCGC AAGATCGCCG ACGCCATCGA ATATTCACCG GCCACGCTTT ACCTGCACTT CGCAAGCCGC GATGAGATCG CGCAGGCCTT GTGCGCGGAA GGCTATGCGC AACTACTGGA AACGTTTGTG CCGCTCGCGG GCATTGCCGA TCCGGCCGAG CGGCTCAAGG CGCTCGGCCG GGCGTATGTG GCCTTCGGCG TTGCGCATCC GGAAACGTAC CGGCTGATCT TCATGGAAGA TCCGAGCTAC ACGGGCGCGG CGTTGGGCGG AGCGGTGAAG GGTAAGGCGG TGGCGGATCC GGCTAATGCC GGGGCGGCGT CCGGCGCTGC GGCGACGAGC GAGGACACCG GAGCCAGCGC GGCTGACGAA GCGAGCAGCG AAACGGCCGC TACCGAGGCC GACCCCGGAG AAGCCGCCTT GCACATCATG ATTTCCGCGC TCGACGAACT CAAAGCGGCG GGGCGGCTGT CGGCGTCGAT GGATGTGGCG GTGTGGGCCG AGGCGTTCTG GGCAAACTTG CACGGCATCG TCGCACTGAA TCTGACGTGC CCCGTGTTTC CGACCGCGCC GCTCGATACC GTGGTGGGCG TTGCGCTCGA CGCCTGGTTG GGCGCATCGC ATGCAGAACA AGCGCCGACG GGCGCCGTGG GCAGCGCCGG CACGCGCAAG AAGAAATCGC CCGGAACGCG TCTCGAATCG GCAGCGCAAC CGGACAACGA TCTCGACGCT CAACCGTTAG CTAAAAAACC GGCGAAAGCC ACAGCGAGCG GTGTCACCGC GCCGCCCGCC AGGCGCAAAA TCACGAGCGC GTGA
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Protein sequence | MFVMGIAERK NRQKQALRER ILDAARRIVM REGFAALSMR KIADAIEYSP ATLYLHFASR DEIAQALCAE GYAQLLETFV PLAGIADPAE RLKALGRAYV AFGVAHPETY RLIFMEDPSY TGAALGGAVK GKAVADPANA GAASGAAATS EDTGASAADE ASSETAATEA DPGEAALHIM ISALDELKAA GRLSASMDVA VWAEAFWANL HGIVALNLTC PVFPTAPLDT VVGVALDAWL GASHAEQAPT GAVGSAGTRK KKSPGTRLES AAQPDNDLDA QPLAKKPAKA TASGVTAPPA RRKITSA
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