Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1733 |
Symbol | |
ID | 6281472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1960805 |
End bp | 1961350 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621294 |
Product | NUDIX hydrolase |
Protein accession | YP_001895365 |
Protein GI | 187923723 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.361555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCT GTTCTGTCTG CGGCCAGGGC GTCAGCCTGA GCATCCCGCC GGGCGACAAC CGCGAGCGTT TCGTATGCGG CAGTTGCGGC ACGGTGCACT ATCAGAATCC GCGCAACGTG GTCGGCACCG TCCCGGTGTG GGACGACAAA GTGCTGCTGT GCCGTCGCGC GATCGAACCG CGCTACGGCT ACTGGACGCT GCCTGCGGGC TTCATGGAAA TGGGCGAGAC CACCGCCGAA GCGGCATCGC GCGAAACGCT GGAAGAAGCC GGCGCGCGCG TCGAAGTGCA AAACCTCTTC TCGCTGCTGA ACGTGCCGCA CGTGCATCAG GTGCATCTGT TCTATATGGC GCGCCTGCTC GATCTCGACA TTGCCGCCGG CGAAGAAAGC CTGGAAGTAA AGCTCTTCGA AGAACACGAA GTCCCCTGGG ACGAGATTGC CTTTCCCACG GTCGGCCAGA CCCTGCGTTT CTTTTTCGCC GACCGCGCCG CCGGCAGCTT CGGCCTGCAC ACGGGCGACA TCTTCCGCTC GCTGCGCGAA GGTTGA
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Protein sequence | MKFCSVCGQG VSLSIPPGDN RERFVCGSCG TVHYQNPRNV VGTVPVWDDK VLLCRRAIEP RYGYWTLPAG FMEMGETTAE AASRETLEEA GARVEVQNLF SLLNVPHVHQ VHLFYMARLL DLDIAAGEES LEVKLFEEHE VPWDEIAFPT VGQTLRFFFA DRAAGSFGLH TGDIFRSLRE G
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