| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1708 |
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| Symbol | |
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| ID | 6284297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1935640 |
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| End bp | 1936383 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621269 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_001895340 |
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| Protein GI | 187923698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.746509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTC TCAAGGTTTT ATACGGTTTC CACGCAGTGA CCGCACGTAT GCGGCATGAC
GCGTCCACGG TCGAAGAGGT CTATTACGAC GCGACGCGCA AAGACCGTCG CATGACCGAG
TTCCTGCACG CGGCGAAAGA AGCCGGCGTG CGTCTGATCG CCGCCGACGA AACGCGTCTC
TGGGGCCTCG CCCACACCGA GCGTCACCAG GGCGTGGTGG CACGCGCCGG CGACATGCCG
CTCGCGCAGA ACCTGGCGGA GCTGCTCGAC GGCATCAACG GTTCGCCGCT GATTCTGGTG
CTCGACGGCG TGACCGATCC GCACAACCTG GGCGCCTGCT TGCGCGTGGC GGATGCCGCC
GGCGCGCACG CGGTGATCGC GCCGCGCGAT CGCGCGGTGG GGTTGAACGC GACGGCCGCG
AAAGTGGCGA GCGGCGCGGC CGACACCGTG CCGTACATCA CCGTGACGAA CCTGGCGCGC
GCGCTGCGCG AGTTGAAGGA CGCGGGGGTG TGGGTCGTCG GCACGGCCGG CGAGGCCACC
AAGAGCCTCT ACGACACGGA ACTGGACGGT CCGGTGGCAT TGGTGATGGG CGCCGAAGGC
GAGGGCATGC GCCGCCTGAC GCGCGACACC TGCGACGTGG TGATGCAGAT CCCGATGGCG
GGCACGGTGG AAAGCCTGAA CGTCTCGGTG GCGAGCGGCG TGTGTCTGTT CGAAGCGGTG
CGTCAGCGGT CGGTGAAGAA GTAA
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| Protein sequence | MARLKVLYGF HAVTARMRHD ASTVEEVYYD ATRKDRRMTE FLHAAKEAGV RLIAADETRL
WGLAHTERHQ GVVARAGDMP LAQNLAELLD GINGSPLILV LDGVTDPHNL GACLRVADAA
GAHAVIAPRD RAVGLNATAA KVASGAADTV PYITVTNLAR ALRELKDAGV WVVGTAGEAT
KSLYDTELDG PVALVMGAEG EGMRRLTRDT CDVVMQIPMA GTVESLNVSV ASGVCLFEAV
RQRSVKK
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