| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1682 |
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| Symbol | |
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| ID | 6284121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1902674 |
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| End bp | 1905187 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621243 |
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| Product | membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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| Protein accession | YP_001895316 |
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| Protein GI | 187923674 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.404284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.183517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTC AGTCGAATTC CCGGGGCGTG ATCGGCGTCG TCACGTTGCT CTTCACCGTG
CTCACCGCGC TTTACTTGTT GATCGGTGGC GCATGGCTTC TTTCGGTGGG CGGCTCCGCC
TACTATCTCA TCACGGGCGT CGCGCTGTTG GGCGTGGCCT GGCTTCTGTG GCGGCGCAGT
CCCACCGCGC TCGTGCTTTA CTCGCTTGTG TTGATCGGCA CGGCGATCTG GGCTCTGATG
GAGTCGGGTC CCGACTTCTG GGCGCTCGCG CCGCGCTCCG GTGTGCTCGT CATCTTCGGC
GTGTGGTTGC TGCTGCTCGT GAGTTGGCGG CTCGTCGGCG AGCGCAAGCT GGGTGTGGTG
TCACTCGTCG TCGCGCTCGT GGCATGGGCG GGCGTGCTGG TCTACGCGAG CTTCAATGAT
CCGCAGCAGG TCAACGGCAC ACTGAGCGCT TCCGCGCCCG CGAGCGGCGC GGGCGCCGGC
AGCGGGATCG ACCCCGCCGA TTGGCCCGCC TATGGACGCA CCCAGGAAGG CACTCGCTAC
TCGCCGCTAC AGCAGATCAC ACCTGAGAAT GTGAAGGATC TCCAGGTGGC CTGGACCTTC
CGCACGGGCG ACATGAAGGG GCCCAACGAT CCTGTCGAAA TCACCGACGA AGTCACGCCG
ATCAAGATCG GCGATCTGCT TTACCTGTGC TCGCCGCACC AGATTCTGTT CGCGCTCGAC
GCGAAGACGG GCACGCTCAA ATGGAAATTC GATCCGAGGC TGAAGTCCGA TCCGTCGTTC
CAGCACGTGA CTTGCCGCGG CGTGTCGTAT GTCGATCTGT CGGCGGGTGC GACGGCGGCC
GCACCCGCAA CAGCGCCAGC GAGCGATGCC ACCGCAACCG CAGCGGCACC CGCAAGTGAC
ACTGCAACTG CCGCCGCGCC CGCGAGCGAT ACAGCCACCG CGACCACAAC CGCCGCACCC
GCCGCCACGC CAGCGAGCGA CACTACAGCC ACCTGTACAC GCCGCATCTA CCTCCCGGTC
AACGACGGCC ATCTCTACGC CCTCGACGCG CTGACAGGCC AACGTTGCGA AGGCTTCGCC
AACCACGGCG ACCTCGATCT CCAACACGCC CAGCCGGTCA CGACAGCGGG CATGTACGAA
CCCACCTCGC CGTCGATCAT CACCAGCAAG GTGATCATCG TGGCGGGCTC GGTCGAGGAC
AACTTCTCGA ACCGCGAGCC GTCGGGTGTC ATCCGCGGTT TCGACGTGCG CACGGGCGAA
CTGCTCTGGG CGTTCGACCC GGGCGCGAAG GACCCGAATC ACATTCCGGG CGCGGGCGAG
CACTACACGT GGAACTCGCC CAACTCATGG GCGCCCGCCG CCTACGACGC GAAACTCGAC
ATCGTCTATC TGCCGATGGG TGTCACGACG CCGGATATCT GGGGCGGCAA CCGCACGCCG
GAGCAGGAGC GTTACGCGAG CGGCCTGCTC GCCCTCAACG CCTCGACCGG CAAGCTCGCC
TGGTTCTACC AGACCGCGCA CCACGACCTG TGGGACATGG ACCAGCCGTC GCAACCCACG
CTCGCCGACA TCACCGGCAA GGACGGCCAG AGCGTGCCGG TCGTCTACGC GCCGGCCAAG
ACCGGCAATC TGTTCGTGCT CGACCGCCGC ACGGGTGTGC CCGTCGTGCC GGCGCCCGAA
ACGCCCGTGC CGCAAGGCGC CGCTCCCGGC GACCATGTTT CGCCGACGCA GCCGTTCTCG
CAGCTTACGT ATCGCCCGTC GAAGAAGCTG ACCGACGCCG ACATGTGGGG CGCGACGATG
TACGACCAGC TCGTGTGCCG TGTGATGTTC CACAAGCTGC GGTACGAAGG CACGTTCACG
CCGCCGTCGC TGCAGGGCAC GCTCGTGTTC CCGGGTAACC TCGGCATGTT CGAGTGGGGC
GGCATTGCCG TCGACACCGA CCGCCAGATC GCCGTCGCGA ACCCGATCGC GCTGCCGTTC
GTCTCGCGTC TGATTCCGCG CGGCCCCGGC AATCCGTTGG AGCCGGTGCC CGGCGCCAAG
GGCAGCGGCA CGGAGTCAGG CATTCAGCCG CAATACGGCG TGCCGTACGG CGTGGTGATC
AACGCGTTCC TCTCGCCGTT CGGCTTGCCG TGCAAGCAGC CGGCATGGGG CTACATCTCC
GCGATCGATC TCAAGACCAA TGAGATTGTG TGGAAGAAGC GCATCGGCAC GGTGCGCGAC
AGTTCGCCGA TTCCGCTGCC GTTCAGGATG GGCATGCCGA TGCTGGGCGG TCCGATCGTC
ACCGCGGGCG GCGTCGCGTT TATCGGCGCG ACGGCGGACA ACTACATCCG CGGATTCGAC
GTGAACAACG GCAAGCAGGT CTGGGAGGCC CGCCTGCCGG CAGGCGGACA GGCCACGCCG
ATGAGTTATT CGATCAACGG CCGTCAATAC CTCGTGATCG CGGCGGGCGG GCACGGCTCG
TTCGGCACGA AGCTCGGCGA CTATGTGATT GCCTACGCGT TGCCGCAGCA GTGA
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| Protein sequence | MTSQSNSRGV IGVVTLLFTV LTALYLLIGG AWLLSVGGSA YYLITGVALL GVAWLLWRRS
PTALVLYSLV LIGTAIWALM ESGPDFWALA PRSGVLVIFG VWLLLLVSWR LVGERKLGVV
SLVVALVAWA GVLVYASFND PQQVNGTLSA SAPASGAGAG SGIDPADWPA YGRTQEGTRY
SPLQQITPEN VKDLQVAWTF RTGDMKGPND PVEITDEVTP IKIGDLLYLC SPHQILFALD
AKTGTLKWKF DPRLKSDPSF QHVTCRGVSY VDLSAGATAA APATAPASDA TATAAAPASD
TATAAAPASD TATATTTAAP AATPASDTTA TCTRRIYLPV NDGHLYALDA LTGQRCEGFA
NHGDLDLQHA QPVTTAGMYE PTSPSIITSK VIIVAGSVED NFSNREPSGV IRGFDVRTGE
LLWAFDPGAK DPNHIPGAGE HYTWNSPNSW APAAYDAKLD IVYLPMGVTT PDIWGGNRTP
EQERYASGLL ALNASTGKLA WFYQTAHHDL WDMDQPSQPT LADITGKDGQ SVPVVYAPAK
TGNLFVLDRR TGVPVVPAPE TPVPQGAAPG DHVSPTQPFS QLTYRPSKKL TDADMWGATM
YDQLVCRVMF HKLRYEGTFT PPSLQGTLVF PGNLGMFEWG GIAVDTDRQI AVANPIALPF
VSRLIPRGPG NPLEPVPGAK GSGTESGIQP QYGVPYGVVI NAFLSPFGLP CKQPAWGYIS
AIDLKTNEIV WKKRIGTVRD SSPIPLPFRM GMPMLGGPIV TAGGVAFIGA TADNYIRGFD
VNNGKQVWEA RLPAGGQATP MSYSINGRQY LVIAAGGHGS FGTKLGDYVI AYALPQQ
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