| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1677 |
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| Symbol | |
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| ID | 6284116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1897071 |
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| End bp | 1897937 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621238 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001895311 |
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| Protein GI | 187923669 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.688428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.314033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTC GCACAACAGG CCGGCATGCC GGCGATACGA AGTCCCGCAT CCTCGACGCC
GCTGAAACGC TCTTCATCGA CTGCGGTTAT GAGGCCATGT CGTTGCGCCA GATTACTTCG
CGTGCCGAAG TCAATCTCGC GGCAGTGAAC TATCACTTCG GCAGCAAGGA ATCGCTGATT
CACTCGATGC TGTCGCGCCG CCTCGACCAT CTCAACCAGG AGCGGCTCAA GCTGCTCGAC
CGCTTCGACA CCCTGCTCGG CGAGCGTCTA ACCTGCGAGC ATGTGCTCGG CGCGATGTTC
ATTCCGGCGC TGCGTCTGTC GCGCGACCCC CGCGTAGGCG GCAAGGCGTT TCTGCGTTTG
CTCGGCCGCG CTTATACCGA TCCGTCGTCG TTCATTCGCG ACTTTCTCAA CGGGCATTAC
GCCTCTGTGG CGGTGCGTTT TTTCGATGCG TTCCAGCGCG CGCTGCCGCA TCTGCCGCGC
GAGGAACTCG GCTGGCGTCT GCACTTCGCG ATCGGCGCGC TGTCGGGCGT GCTGGCCGGC
ACCGACACGG ACAGCCTGCT TTCCGAGTTC TCGCAGGGCA AGTCGATGAA CGACCTGCAA
CTCATCGCCC GTCTCGCTTC GCTGATGGTG GCCGCGCTCA AGGCGCCGTT GCCCGACGGC
ACGCAACTGG CCGCGTTCGC CGCGGTACTC GGCGACGCTA GCGAAGGCGG CTTGGAGTGC
GCCGGCGTCG GCAGTACTGA AGCTGCGAGC GCGACGCGCA CCGAGGGCGG ATCGGAGTCG
CCATCGCCGG CCGTATCGGA AAGCGAACAT CGAGGCGGCG ACCTGGAAGC AGGTTCGCGT
CAGCACGCGT TTTACGGCGC GGCTTAG
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| Protein sequence | MAVRTTGRHA GDTKSRILDA AETLFIDCGY EAMSLRQITS RAEVNLAAVN YHFGSKESLI
HSMLSRRLDH LNQERLKLLD RFDTLLGERL TCEHVLGAMF IPALRLSRDP RVGGKAFLRL
LGRAYTDPSS FIRDFLNGHY ASVAVRFFDA FQRALPHLPR EELGWRLHFA IGALSGVLAG
TDTDSLLSEF SQGKSMNDLQ LIARLASLMV AALKAPLPDG TQLAAFAAVL GDASEGGLEC
AGVGSTEAAS ATRTEGGSES PSPAVSESEH RGGDLEAGSR QHAFYGAA
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