| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1666 |
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| Symbol | |
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| ID | 6282379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1882540 |
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| End bp | 1883070 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621227 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001895300 |
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| Protein GI | 187923658 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.47725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTTCG AAGCCGAAGT GATTTCGTGG CTCCCGCAGC TGCGCCGCTA CGCGCGCGCA
CTGACGGGCG ACCACGCGTG GGCCGACGAC CTCGTGCAGG ATACGGCGGA GCGCGCGCTC
GCCCGTTGGG CGGCGTTCCG GCCGGACAGC AATCTGCGCG CATGGCTCCT CACGATCCTG
CGGCATCTCT ACATCGACCA GTTGCGCGGC CGCCGCGAGA TCGCCGTCGA CGACGAGAGC
GCGCCGTGGC GCAATCTCGA AGCGCCGCAA GGGGAGGTCG ACGGTCTCGT GCTGCGCGAT
CTGCAGCGCG CGCTGTATTG TCTGCCTGTC GAACAGCGCG AAGTGCTGTT GCTGGTCTGC
GTGGAGGAGC TGTCTTACCA GGAAGCGTCG CGCGCGCTCG GCGTGCCGAT CGGCACGGTG
ATGTCGCGGC TCTCCCGCGC GCGCGAACAC ATGCGCGCGT TGCTGACGGA GGGACCGGCG
CATGGGCCGG CGCGTAAAAA TCCACCGTTG AAAGTAGTGA GAAACCCGTG A
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| Protein sequence | MNFEAEVISW LPQLRRYARA LTGDHAWADD LVQDTAERAL ARWAAFRPDS NLRAWLLTIL
RHLYIDQLRG RREIAVDDES APWRNLEAPQ GEVDGLVLRD LQRALYCLPV EQREVLLLVC
VEELSYQEAS RALGVPIGTV MSRLSRAREH MRALLTEGPA HGPARKNPPL KVVRNP
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