| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1665 |
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| Symbol | |
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| ID | 6282378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1881460 |
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| End bp | 1881978 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621226 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001895299 |
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| Protein GI | 187923657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.655904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG CAGAATCGCA TCCGCAAAAC GACTTCATGA ACGCTGCGCG CAAAGAACGA
AAGCGCGTTG AGATTTACCT TGTCAACGGC ATTCGCCTGA CGGGGTGCAT CGAATCGTTC
GATCAGTATC TGGTGATGCT GCGCACACCT GTCGGCCTGC AAGGCATCTA CAAGCGCGCG
ATCTCGACGA TCCAGCTCGA CACCGGCACG CGTCCGGCTC CGCGCGCTGG GCGTCCCTCG
CACGGTGAGC ACACCACGCG TGGCCCGCAC GGTTCGCGTG AACCACGCGA TCACCGTGAG
CCGCGCGAAC CGCGTGAACC GCGCGAGTCG TATGGCGCGC CGTCTTCGGA CCGGCCTGCG
TCGGATCGTA GCGGCGGCAC GTCGGACGGC CCGGTGGTCG TTACGCGCCG CCGGCGTCTA
TTTGGCACGG GCGGCGACGG CGGCAATCAC GGTGGTGGCA ACCGCGGCGG CGACAACCAT
GGCGGCGGTA ATCACGGCGG TAATGGCGGC AGCGAATAA
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| Protein sequence | MASAESHPQN DFMNAARKER KRVEIYLVNG IRLTGCIESF DQYLVMLRTP VGLQGIYKRA
ISTIQLDTGT RPAPRAGRPS HGEHTTRGPH GSREPRDHRE PREPREPRES YGAPSSDRPA
SDRSGGTSDG PVVVTRRRRL FGTGGDGGNH GGGNRGGDNH GGGNHGGNGG SE
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