Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1662 |
Symbol | |
ID | 6282890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1879529 |
End bp | 1880257 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621223 |
Product | putative signal peptide protein |
Protein accession | YP_001895296 |
Protein GI | 187923654 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.826881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.955834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCGAA AGTTGAAACT GCGACAGATT GCGCTCGCCG CATTGATCGC GATGGGGGCG GCGCAAGGCG TCAATGCGCA GGCTCTGCAG AACAGCAGTG CGAGCGCTGG CGCCATCGGC GGCGTTGTTT CCCAGCCAGG CACGACGGCC GCATTGCCGG CTACCTCACA GGCAGGACAG GCGCAGACCT CAGCCCTCAC GTCGGATGAA GCGAAGCAGT CCGCGGCAGG CAACGTGGCG GAATTGCAGC AGATGATCCG CGGTTCGGAT CTGAGCGAAT TGCGCACCAC CTATAACGGC AGTTACGGCG CGAGCTTGCT GTTTTACGGC AAGGAAATGA CGTACTACGT GGCGCTGTTC CAGCAGAAAA ATTTCTGGCG CGTCATCAAG ACGCAGGACG CGACGCGTGC CGACATGATC TACAAGGATT TTGTGCGTCA GACGATGCAA CTGTCAGACG TCGAGATTCG CCGCACGCAA CTCGAAGCGC AAAAAGCGTT CACCGAACGG ATGATCGCGT TGCAGCAGGA CAATGCGAAC CGTCTGCAGG CGGACCTGGA TGTGGCGCGT CAGCAGCAGA GCATCGTGGC GACCCAGCAG CAGCAAACTC GCGCCGAAGC GACCTCGCTG GCTCAACAGA AGGCTTCCGC GCAGGATCAG TTGCGCGCCG CGCAGCGCCA GGTGCGCGAT CTGCAGCGTC AATTGGAAAG CGGTTTACCG GTGCGTTAA
|
Protein sequence | MDRKLKLRQI ALAALIAMGA AQGVNAQALQ NSSASAGAIG GVVSQPGTTA ALPATSQAGQ AQTSALTSDE AKQSAAGNVA ELQQMIRGSD LSELRTTYNG SYGASLLFYG KEMTYYVALF QQKNFWRVIK TQDATRADMI YKDFVRQTMQ LSDVEIRRTQ LEAQKAFTER MIALQQDNAN RLQADLDVAR QQQSIVATQQ QQTRAEATSL AQQKASAQDQ LRAAQRQVRD LQRQLESGLP VR
|
| |