Gene Bphyt_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1662 
Symbol 
ID6282890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1879529 
End bp1880257 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID642621223 
Productputative signal peptide protein 
Protein accessionYP_001895296 
Protein GI187923654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.826881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.955834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGAA AGTTGAAACT GCGACAGATT GCGCTCGCCG CATTGATCGC GATGGGGGCG 
GCGCAAGGCG TCAATGCGCA GGCTCTGCAG AACAGCAGTG CGAGCGCTGG CGCCATCGGC
GGCGTTGTTT CCCAGCCAGG CACGACGGCC GCATTGCCGG CTACCTCACA GGCAGGACAG
GCGCAGACCT CAGCCCTCAC GTCGGATGAA GCGAAGCAGT CCGCGGCAGG CAACGTGGCG
GAATTGCAGC AGATGATCCG CGGTTCGGAT CTGAGCGAAT TGCGCACCAC CTATAACGGC
AGTTACGGCG CGAGCTTGCT GTTTTACGGC AAGGAAATGA CGTACTACGT GGCGCTGTTC
CAGCAGAAAA ATTTCTGGCG CGTCATCAAG ACGCAGGACG CGACGCGTGC CGACATGATC
TACAAGGATT TTGTGCGTCA GACGATGCAA CTGTCAGACG TCGAGATTCG CCGCACGCAA
CTCGAAGCGC AAAAAGCGTT CACCGAACGG ATGATCGCGT TGCAGCAGGA CAATGCGAAC
CGTCTGCAGG CGGACCTGGA TGTGGCGCGT CAGCAGCAGA GCATCGTGGC GACCCAGCAG
CAGCAAACTC GCGCCGAAGC GACCTCGCTG GCTCAACAGA AGGCTTCCGC GCAGGATCAG
TTGCGCGCCG CGCAGCGCCA GGTGCGCGAT CTGCAGCGTC AATTGGAAAG CGGTTTACCG
GTGCGTTAA
 
Protein sequence
MDRKLKLRQI ALAALIAMGA AQGVNAQALQ NSSASAGAIG GVVSQPGTTA ALPATSQAGQ 
AQTSALTSDE AKQSAAGNVA ELQQMIRGSD LSELRTTYNG SYGASLLFYG KEMTYYVALF
QQKNFWRVIK TQDATRADMI YKDFVRQTMQ LSDVEIRRTQ LEAQKAFTER MIALQQDNAN
RLQADLDVAR QQQSIVATQQ QQTRAEATSL AQQKASAQDQ LRAAQRQVRD LQRQLESGLP
VR