| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1656 |
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| Symbol | |
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| ID | 6282750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1872933 |
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| End bp | 1873961 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621217 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001895290 |
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| Protein GI | 187923648 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.394438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGCG CGGTTCTGGT CTTCGCGGCG CTCGCGCTAC TGTGCGCGGC GCTTGCCTTG
CTGCTCTGGC AGCGCGGCGC GCAACGCAAA GGCCAGGCGA GTGCGGAACG TTATATCGAC
AGCCGCATGG CGATGCCAAC CGGCGCAGCC GTGGGCGGCA TGGGCGGCGG TGCGGCAAGC
ACGGCGCGCG CGGCCCCCGC GCGCGTCACG GCCCAGCACG CCGTGATCGC GCCGCAGGCG
CCGTCGGCCG ATGCGGGCTG GCTCGCGCGC TGGCGGTACG GCCAGGCGCG CGTGCGCTTC
ATGGTGCAAC ACGCGATGGC GCGCGCCGGC ATTGCCAATG CCAAAGCACC TGCCGCGATC
GCCGGCGCGA TCGTGATGCT GCTGTGCGGC TGGGCCGCCA TGGTGGGCGG CGCGCTCGCG
GCCTGCGTCG CGTTGATCGC CTGCGTGATG TTCTTCTATT TTCTGCTGAC GATGCGCGTG
AACAAACGCC GTCAGCAGAT CGTTCGGCAG TTGCCGCTCT TTCTCGACGG CATCGTGCGT
CTGATCACGC TCGGCAATAG CGTGCCCGCC GCCTTCCAGG CCGCGCTGCA AACCACCGAG
GCGCCGTTGC GCGAATGCCT CGACTACGTG TCGCGGATGT TGCGCACCGG CGTCGAAATC
GATCGCGCGC TGTCGCAGGT TGCGCAGATC TACGGCGTGC GCGAACTCGA ACTGGTCGGC
GCCGTGCTGC GGCTGTCGGT CAAATACGGC GGCCGCGCCG ACGTGATGCT CGAACGGATG
GCCTCGTTCA TGCGCGATCT CGAACACGCC GAGCGCGAGC TGGTGGCGAT GTCGTCGGAA
ACGCGGCTGT CGTCGTGGGT GCTGGCCATG TTGCCGATCG GCATCGGCGG TTTTCTGATT
CTCTCCAATC CTAAGTATTT CGCTTCGATG TGGTTCGACC CGACTGGCCG GCAGCTCGTC
TATCTGGCGT TCGTGCTGCA GGTGCTCGGG GCATATCTGC TGTACCGCCT CGCGAATCTG
AGGAATTGA
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| Protein sequence | MSSAVLVFAA LALLCAALAL LLWQRGAQRK GQASAERYID SRMAMPTGAA VGGMGGGAAS
TARAAPARVT AQHAVIAPQA PSADAGWLAR WRYGQARVRF MVQHAMARAG IANAKAPAAI
AGAIVMLLCG WAAMVGGALA ACVALIACVM FFYFLLTMRV NKRRQQIVRQ LPLFLDGIVR
LITLGNSVPA AFQAALQTTE APLRECLDYV SRMLRTGVEI DRALSQVAQI YGVRELELVG
AVLRLSVKYG GRADVMLERM ASFMRDLEHA ERELVAMSSE TRLSSWVLAM LPIGIGGFLI
LSNPKYFASM WFDPTGRQLV YLAFVLQVLG AYLLYRLANL RN
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