| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1654 |
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| Symbol | |
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| ID | 6282748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1870286 |
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| End bp | 1871527 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621215 |
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| Product | putative pilus assembly protein, CpaE-like protein |
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| Protein accession | YP_001895288 |
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| Protein GI | 187923646 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.735693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA GAACGCATTC ATTGACTGAA CGGGCGGTCA CCGATTATTT CGTGTTCGCG
TCGCTGGCCG ACGAGCACGT GCATTGGCTC GCCGATACGC TGGTGGGCGC CGGCGTGGTC
GAAGCGGCCA CGCTCGATCC GTCGATGCTG ATGCAGCGCA TCGCGGCGCT CAATCCGTCG
CTGGTGTTCG TCGATTTTTC CGGCGGCCGC GCCGCGGCGG CGAGCGCTGC CGCGAACGCA
GTACGCACCG CTTATCCGGG CATGCAGATC GTCGCGCTGG GCTCGCTCGC CGAACCCGAA
AGCGCGTTGG CGGCGTTGCG CGCCGGCGTG CGCGATTTCA TCGATCTGTC GGCGCCGGCC
GAAGACGCGC TGCGCATCAC ACGCCAGGTG CTCGACAATC TCGTCGAGCC GGTCAGCCGC
CATGGCCGAG TCACCGCGCT GCTGGGCGCG CGCATCGGCA TGGGCGTGAG CACGCTGGCC
GCGAATCTCG CGGTGCTGCT GCAACGGCGC GACTCCGCGC AGGGCCGGCA GGCCGCCTTG
CTCGATCTCG GCCTGCCGGC CGCCGACGGA TCGCTGCTGC TGAACACGCG CAGCGAATTC
AATTTTGTCG AAGCCGTGCG CAACCTGCGC CGCTTCGATC AGACCTTCGT GCATACCGCG
CTGTCGCATC ACACGAGCGG CCTCGCGCTC ACCACGCTGC CGCCGAATCT CGCCGATATG
CGCGAGGTCT CCTATTCGTC GTCGATCGGC TTGCTGAACC GTCTGCGCGC GTTCTTCGAC
CAGCAGATCG TCGACCTCGG CGGCTTCACC AACAGCGAGT TCATCGCCCA CGTCGTGCAG
GCCGCCGACG AAACCTGGCT GCTGTGCGAC CAGGGCGTGG CCTCGATCGT GTCGGCCGTC
GGCGTGCTCG ACGCGTTGCG CGAAGAGGGC GTGGAGACCG CGAACGTGCG CTTGATCGTC
AACAAGTTCG ACGCGGAGCT CGGCCTCGCC GCCGCGCAGA TCGCGCAGCG TCTGGATATT
TCGCTGCTCA CCGCCTTGCC GGAGCGGCGC GTCGCGCTTG GCCAGGCGGT CAATCAGGGA
CATCTGCTGG TCGATGCCGC CGCGCGCGAT CCGTATGTGC GCGCGCTCGA GCCGTTGATC
GAGCGGCTCG GCGGCGGCGA GCGCGCGGCG GCGCAGGCAC GCGGCAAATC GGCACTCGGC
GCGCTCAAGC GCTTCATTCC AACCACTCAC AAGCGGTCAT AG
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| Protein sequence | MNARTHSLTE RAVTDYFVFA SLADEHVHWL ADTLVGAGVV EAATLDPSML MQRIAALNPS
LVFVDFSGGR AAAASAAANA VRTAYPGMQI VALGSLAEPE SALAALRAGV RDFIDLSAPA
EDALRITRQV LDNLVEPVSR HGRVTALLGA RIGMGVSTLA ANLAVLLQRR DSAQGRQAAL
LDLGLPAADG SLLLNTRSEF NFVEAVRNLR RFDQTFVHTA LSHHTSGLAL TTLPPNLADM
REVSYSSSIG LLNRLRAFFD QQIVDLGGFT NSEFIAHVVQ AADETWLLCD QGVASIVSAV
GVLDALREEG VETANVRLIV NKFDAELGLA AAQIAQRLDI SLLTALPERR VALGQAVNQG
HLLVDAAARD PYVRALEPLI ERLGGGERAA AQARGKSALG ALKRFIPTTH KRS
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