| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1652 |
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| Symbol | |
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| ID | 6282746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1867754 |
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| End bp | 1868704 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642621213 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001895286 |
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| Protein GI | 187923644 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.695685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.658487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATC TGACCAAAAT TCTTGCGGGC GTTCTGATCG CGGTCGCGCT CGTGCTCGGC
CTGTTCGCGT GGTCGCTGTC GCGCCGCCCG GCGCTGGTCG CGGTCACGCC CGCCACGCAA
GCGAGCTTCC GGGTAGTGGT GGCGACTCAC ACGTTGCCGG CGGGCAAAGC CATCACCGTC
GACGATGTGC GCGTGCAGTC GCTGCCGATC AATCCGAACG GCGCCTTCAC GGACCCCGCG
CAACTGGCCG GGCGCGTGCC GAACGCGGAG ATCGGCGCGG AATCGCCGGT GCTGGAAAGC
CAGTTGTCCT CGGGACTCGC CGAGCGCGTC GAACCGGGCG AGCGCGCGCT GGCTGTGCGA
GTCGACGAAG GCAACGCGGT CGCCAACCGG TTGCGGCCCG GCAATTTCGT CGACGTGTTT
TTCACGCTCA AGCGCGACGC CAGCATCGGC AACGGCGGCG AAATCGACCG CACCCAGGCG
CGTTTGCTGA TGTCGAAAGT GCGTGTGCTC GCGTTCGGCA ATGCGACCGC GAGCGGCGAC
AGCGCGGGCG ATCCGAACGG CATGGTCCGC ACCGCGGTGC TGGCGGTGCC GGTCGCCGAT
ATCGACCGTC TGACGCTCGC CGAGAGCGCC GGCCGTCTGA TTTTCGCGCT GCGCAATCCC
AAGGATCCCG AAGTAATCGA CCAAAGCGTG TTGCCGGCCT ATCCGGGCGT GCTGAAGACG
GCGGCGCATG CGGGCGCGGC CGAGCCGCTG CGGGACTCGA CGCGCGCCGC GGTCGGCGTG
GCGCTCGACT CGTTGTCGGG CACCGCCAAC GCGGGTGGCG CGAGCGCCGC CGCGCGGCCG
CCGTTGCCGC ATATGCCGCT GCCGCCGACG CGCGTGGCGG GCAACACCAA CAGTACAAAG
AGCGGTATCG AAGTGATACG GGGTGGGCGC GCCGAAACGG TCGCCTGGTA A
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| Protein sequence | MPNLTKILAG VLIAVALVLG LFAWSLSRRP ALVAVTPATQ ASFRVVVATH TLPAGKAITV
DDVRVQSLPI NPNGAFTDPA QLAGRVPNAE IGAESPVLES QLSSGLAERV EPGERALAVR
VDEGNAVANR LRPGNFVDVF FTLKRDASIG NGGEIDRTQA RLLMSKVRVL AFGNATASGD
SAGDPNGMVR TAVLAVPVAD IDRLTLAESA GRLIFALRNP KDPEVIDQSV LPAYPGVLKT
AAHAGAAEPL RDSTRAAVGV ALDSLSGTAN AGGASAAARP PLPHMPLPPT RVAGNTNSTK
SGIEVIRGGR AETVAW
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