Gene Bphyt_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1638 
Symbol 
ID6284572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1849013 
End bp1849528 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content60% 
IMG OID642621199 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001895272 
Protein GI187923630 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00207859 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGAGC CGTCCGCTAC ACCCACGCCG GACCTCAGCG AATATCAGCT AGGCGAGAGC 
GTCGGCTATC TGATCTCGCG AGTGAAATCG ACGCTGTCCA ACCTGGTCAC CCAGCGCAGC
ATGGCCGAAC TCGGCATTAC CAGCCAGCAG GGCAGCATCC TGTTCATGGT GGCGAGCGGC
AAATGCCTGC TGGCGGCCGA ACTGGCCCGC GAATACGGTA TCGACGCAAG CGCCGTCACG
CGTCTGATCG ACCGGTTGGA GAAACGCGGC CTGCTGACCC GGGTGCGCAG CAGCGAAGAC
CGGCGGGTCG TGCGCCTCGC GCTCACGCCG GAAGGTCATG CCATCGCCGC CAAAATGCCG
GCTATTTTCA ACGGCGTGCT GGATAGCCTT TTAGGCGGCT TCACCCAGGA AGAAGTGGGT
TTTCTGAAGA GCATGCTGCG TCGGGTGCTT ATCAATTCCG GCGAACAAAC GGGACTAACC
CGTGATGCAG CAAGCAATTT TGACAGCAAA TCGTAA
 
Protein sequence
MTEPSATPTP DLSEYQLGES VGYLISRVKS TLSNLVTQRS MAELGITSQQ GSILFMVASG 
KCLLAAELAR EYGIDASAVT RLIDRLEKRG LLTRVRSSED RRVVRLALTP EGHAIAAKMP
AIFNGVLDSL LGGFTQEEVG FLKSMLRRVL INSGEQTGLT RDAASNFDSK S