| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1637 |
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| Symbol | |
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| ID | 6284571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1847455 |
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| End bp | 1848963 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621198 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001895271 |
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| Protein GI | 187923629 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.774452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00150735 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATCCC TTTCCCTGTC CGCGCCCGCG TTTTCGAGCC GGGCCGCTGT CGCCGCCGCG
GTGACGGCGC TCGCCCTTAC GGGGTGCGCG AACTACTTCG GTATGAAAAG CGACAAGCAG
ATCTCGTCGC CCGCTGAGTA TGAGTCCACC CAGAGCCTCG CGGGTCAGGG CGGCCAGTGG
CCGTCGCTCG ACTGGGCCAA CCAGTTCGGC GACCCGCAAC TGCCCAAGCT GATCGCCGAA
GCGCTGGAAG GCAGCCCGTC GATCGCGCAG GCGCAGGCGC GTCTCGCCAA GGCTTCGTCG
TATATCGAGA GCTCGCGCTC GGCGCTGTAC CCGAAGGTCA ACGGCAGCTA TTCGTGGACC
CGCGAACTCT TCTCGGGGAA CGCGCTCTAC CCGCCTCCGT ACGGCGGCAC CTGGTATAGC
GAGAACAACG TGCTCGCCAG CGCGTCGTGG GATCTGGATC TGTGGGGCAA GAATCGCGAG
CGCCTGGGTC AGGCCGTGTC GCAGGAAAAA GCGGCCGAGG CCGACATGCA GCAGGCGCGC
GTGACGCTCG CGGCGTCGGT GGCCAGCACA TATAACCAGC TCGCCCAGCT GTACGCATTC
CGCGACATCG CCGCGCGTGA AATCGCCAAC CGCCAGGATA TCGGCCGCAT CACCAACGGG
CGCGTGACCG CCGGCCTCGA CACCAATGTC GAGCGGCAAA CCGCGAACGG CAACATCGCG
ACCAGCCAGT CCAATTTGAC CGACCTCGAC GGCCAGATCA CCGTCGTGCG CTATCAATTG
GGCGCGCTGC TCGGCAAGGG TCCGGATCGC GGCTTGCAAA TCGCGCAGCC CGCGCTAACC
AACGGCAACG TCGTGGCGCT GCCGAACAAC CTGCCGGCCG ACCTCGTCGC GCGCCGCGCG
GATATCGTCG CCGCGCGTTG GCAAGTCGAA GCCGCGATGC ACGACGTGAA GGAAGCCAAA
GCGGAGTTTT TCCCCGACGT GAACCTCGCG GCCGGCTTCG GTTTCGACGC GTTCGGCTGG
GGCCGTTTCC TGAAGGCCGG CAGCCGTCAG ATGCAATTCG GTCCGGCCAT TCACCTGCCG
ATCTTCGACG CCGGCGCGCT GCGCTCGCAG CTGAAAGGCC GCTACGCCGA CTTCGATCTG
GATGTGGCGA ACTACAACCA GACGCTGATC AGCGCCCTCT CGGACGTCGC GACGCAAGTG
TCGTCAATTC GTTCGATCGA CCAGCAGCAA GGCGACGCAC AACGCGCGCT CGACGCATCG
ACCAAGGCAT ATCAGTTGGC AGTGATTCGC TACAAAGCCG GTTTGTCGCC GCAGTTGCAG
GTGCTGACCG CCGACCAGAA CCGCCTTGCC GCCGACCAGA CGGTGACCGG CTTGAAGATG
CGCCGCCGCG ACATGCAGAT CGGCCTCATC AAGGCGCTCG GCGGCGGTTT CGACGCGACA
CAGACCGGCC TCGTGGTGCC GACCGATGCT CCGGCATCGG CCACCGCCGC GACCGCCGCG
GCCAACTGA
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| Protein sequence | MKSLSLSAPA FSSRAAVAAA VTALALTGCA NYFGMKSDKQ ISSPAEYEST QSLAGQGGQW
PSLDWANQFG DPQLPKLIAE ALEGSPSIAQ AQARLAKASS YIESSRSALY PKVNGSYSWT
RELFSGNALY PPPYGGTWYS ENNVLASASW DLDLWGKNRE RLGQAVSQEK AAEADMQQAR
VTLAASVAST YNQLAQLYAF RDIAAREIAN RQDIGRITNG RVTAGLDTNV ERQTANGNIA
TSQSNLTDLD GQITVVRYQL GALLGKGPDR GLQIAQPALT NGNVVALPNN LPADLVARRA
DIVAARWQVE AAMHDVKEAK AEFFPDVNLA AGFGFDAFGW GRFLKAGSRQ MQFGPAIHLP
IFDAGALRSQ LKGRYADFDL DVANYNQTLI SALSDVATQV SSIRSIDQQQ GDAQRALDAS
TKAYQLAVIR YKAGLSPQLQ VLTADQNRLA ADQTVTGLKM RRRDMQIGLI KALGGGFDAT
QTGLVVPTDA PASATAATAA AN
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