| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1634 |
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| Symbol | truB |
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| ID | 6284568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1843440 |
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| End bp | 1844375 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621195 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001895268 |
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| Protein GI | 187923626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.767781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000962415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCAC CTCAACGCCC CCGCGTGCCG CGTCGCGCGC TCGACGGCGT GCTGCTGCTC
GACAAGCCGC TCGGCCTGTC GAGCAACGAC GCGCTGATTC GAGCGAAGCG TCTCTATCTG
GCGAAAAAGG CGGGCCACAC CGGCACGCTC GATCCCTTGG CCACAGGCTT GCTGCCGCTC
TGTTTCGGCG AAGCCACCAA GTTTTCGCAG GACCTGCTCG AAGCCAATAA GACGTATGAG
GCCACCATGC GTCTCGGTGT CCGCACGACC ACCGGCGACG CCGAAGGCGA AGCGATCGAC
ACGCGCGAAG TAACCTGTGA CGAGGCCGCG ATTCTGGCGG TTCTGCCGAC GTTCCTCGGC
GAAATCACGC AGGTTCCGCC GATGTATTCG GCGCTCAAAC GTGACGGCAA GCCGCTGTAC
GAATACGCGC GCGCGGGCCA GACGGTGGAG CGGGAAGGGC GACAGGTGAC GATCCTCGCG
CTCGAAATGC TCGCCTGCGC GCTGCCGGAC GTAACCTTTC GCGTGACGTG CAGCAAGGGC
ACGTATGTGC GCACGCTGGC CGAGGATATC GGCGAAGCGT TGGGCTGCGG CGCGCATCTG
GTGGCGCTGC GGCGCACCGG TGTCGGCGCA CTGACGCTGG ACAATTCGGT GACGCTCGAC
GCGTTGTCCG ACGCTGCCGA AAGCGAACGC GATGCATGGC TGCAACCGGT GGATGCGTTG
CTGTCGACAT TCCCGCTCGT GCGCTTGAAT GAAGACGCCA CGCGCCGCTT CCTGCACGGC
CAGCGGTTGA AACTGTCCGA ATTGACCATC ACGGGCGATG CAGTGAATGC ACCGCGCGTC
CGGGTGTACG CGGAGCAAGG GCGTCTGCTT GGCGTCGCCA AACAAGGCGA GGGCGTGCTG
GCGCCCGAGC GGCTGGTCGT CACGACGGAG AGCTGA
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| Protein sequence | MTAPQRPRVP RRALDGVLLL DKPLGLSSND ALIRAKRLYL AKKAGHTGTL DPLATGLLPL
CFGEATKFSQ DLLEANKTYE ATMRLGVRTT TGDAEGEAID TREVTCDEAA ILAVLPTFLG
EITQVPPMYS ALKRDGKPLY EYARAGQTVE REGRQVTILA LEMLACALPD VTFRVTCSKG
TYVRTLAEDI GEALGCGAHL VALRRTGVGA LTLDNSVTLD ALSDAAESER DAWLQPVDAL
LSTFPLVRLN EDATRRFLHG QRLKLSELTI TGDAVNAPRV RVYAEQGRLL GVAKQGEGVL
APERLVVTTE S
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