Gene Bphyt_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1622 
Symbol 
ID6283750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1828249 
End bp1829037 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID642621183 
Productprotein of unknown function DUF218 
Protein accessionYP_001895256 
Protein GI187923614 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.278756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGC TGCGGCGCGA TACCAAGCCC GTGGATTTGT CCCGAAAGAC ATACGTTACC 
CCATTTAAAT TGATTCTATT CACTTTATTA GCGCTTTTTT TTGCAGCAAT CGTGCTATGG
AAAGGCGCCC GCCGCCCTCT CGCCATCTTC ACGGTCGCCT TCTTCTGGCT CCTCGCCGCC
GGCTGGCTCA CCGCACCCTT GCTGCGGTTG GCGCAGCCGC ACTGGCGGAC GGAGGCGCCC
GCCACGTTCG CGCCGCGCAC CGCGATCATC ATGCTGGGCG GCGGCACAAT CTACGGCGCC
GGCCAGGTCC TCATGCCCCC GCGCGACGTG CTTGCGCGCA TTGCGGCGAG CGCCGAGTAC
TACGCCGCCT GCAAACGCGC GGCGGACATC TGCCATGTGA TCGTGAGCGG CGGCAATCCG
CAGCGGCATC GCGCGACCGA AGCCGACACG TATCTGCCTT ACCTGCTGCG CCGACAGGTG
CCGCGCGCTG ACATCGTGCT GGAAAACAGA AGCCTCACGA CCTATGAAAA CGCGCGCAAC
GTGTCCGGCA TTGTGCACGG CTCGCGTTAC GATTCGCTGA TCCTCATCAC CTCCGCTTAT
CAGATGCCGC GCGCCTTGCT CGACTTCCAC CGCTTCGGCC TCACGCCGCA GCCTATGATC
TCGAACGCGA TCGGCGCACG TCTCGGTGTA CTACCGCGAT ATGACAATCT GGCGAGTGCG
GAAATCGCGC TGCATGAATT AATTGGCATC GCGCAATTTC ATGTCTATCG CGCGATCGGC
TGGTTCTGA
 
Protein sequence
MQPLRRDTKP VDLSRKTYVT PFKLILFTLL ALFFAAIVLW KGARRPLAIF TVAFFWLLAA 
GWLTAPLLRL AQPHWRTEAP ATFAPRTAII MLGGGTIYGA GQVLMPPRDV LARIAASAEY
YAACKRAADI CHVIVSGGNP QRHRATEADT YLPYLLRRQV PRADIVLENR SLTTYENARN
VSGIVHGSRY DSLILITSAY QMPRALLDFH RFGLTPQPMI SNAIGARLGV LPRYDNLASA
EIALHELIGI AQFHVYRAIG WF