| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1615 |
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| Symbol | |
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| ID | 6281872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1821669 |
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| End bp | 1823756 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621176 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001895249 |
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| Protein GI | 187923607 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.481167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT TCGAACAGAG CGCATCGGCG CCGCCTGAGC TCGACGACAT CGGCGTGAGC
CTGCCCGCGC CAGCGGATTT CAGTATCGCG CTCGCCGAAG GTTTCGCACG GCGCATCGGT
GCGCTGGCGC GGCGCGGCGG CGCGTCGGCC GAGGCGGTCA AGTGGGCGGC GCGCAGCGCG
TTCGCCGCGA GCCGCGCGAC GGCCGAAGGC CACGTGTGCG TGCCGCTCGC CATACTGGCG
CGACGCTTCG AGGCGTCGAG CGCCGAAGTG CGCACCGCGC TGTTCGCGAG CGGCATGGCG
AGCGATGGTT CGCAAAGCTC GGCGGCGTTG CGGCCGCTGG TGGTCGATGG GCAAGGGCGG
CTGTATCTGG CTCGCTATTA CGACTACGAG CGGCGGCTTG CGCGCGCGTT GGTGGCGCAT
GCGCGCGCGG ATGAGGGTGT CGAGCGATTG GCCAATGCCC AGACCCTCCA CGAGCGTCTC
CTGCGCTACT TCGGTCCGCC GAAGGACAAC GAAGTCGACT GGCAACGCGT CGCGGCGGTC
ATGGCGCTGT CCGGGCAACT CACCATCGTC AGCGGTGGAC CGGGCACCGG CAAGACCACC
ACCGTGGTCG GCGTGCTTGC CTGCCTGCTC GATGCACGCA CGGATCTGCG CATCGCACTC
GCGGCTCCCA CCGGCAAAGC CGCGCAGCGC ATGCAGGAGG CCCTGCTCGC GCGCGCTGGC
GATTTGCCGC CTGAACTCGC CGCGCGTTTG CCGCAGACGT CGTACACCTT GCATCGTTTG
CTCGGCTCCG GGCCGGGAGG GCGCTTCCGG CATCATCGGG ACAATCCGCT GCCTTACGAC
GTCGTCGTGA TCGACGAGGC GTCGATGATC GACGTCGCCA TGGCCGCGCA TCTGCTCGAC
GCCATCGCGC CGCAGACTCG TCTCGTGATG CTCGGCGACA AGGACCAGCT CGCCGCCGTC
GAGGCCGGCG CGGTGTTCGC CGAACTCAGC GCGCGCCCCA CTTTTACGCA AGGTGGTTTG
CAGCGGATCG CCGACGCGCT CGGCATCGAC GAAAAGCAGC TCACGCAGGC GTTGCCGGGC
GCGTCGCGGG GCTTGGGCGA GGAGCCTACG GATTTCTCCG CGCAGTCATA CGTGCCTAAC
GACGATCTGT TTGCATACGC GGACTCACCT GGTGGGTTCG ACGAACCACC CGGCGGTGAC
CTTTTCGAAA GCGCCGCGCC GCCACCTTCG CACATAGCCA CGGCGTCGCC CATGCAGAAC
CCGCTCGCCG ATTGCGTCGT CTGGCTCGAG CGCAACTATC GGTTCGGTCT GGAGTCGCCC
ATCGGCCGCC TATCGCTCGC GATTCGCAAC GGGTCGGCTA GCGCCGCGCT CGATGTCTTG
CGTACCGATC CCACTGAAAC ATGCGCGGCG GCGCTTTACG AAGACACGCA CGCAACGCTT
ACCGAGCGCA CCGTCGCACG ACTCGCCGCA GGTTTCGCGC CGTATGCCGA CGCGCTTGCC
ACAGCGCTAG CCGCCGAAGC ACCCGACCCG TTGCCGCTTT TCGACGCGTT GAACCGTTTT
CGCATTTTGT GCGCGACCCG TTCCGGACCG CGCGGCGTCG ATCAGGTGAA TGCGGCGATG
GCGGCGCAGG TGCGGCGCGC GGCGGGTGTG ACGCTGGCAG TGGGCGCGCA GTGGTTCGCC
GGGCGTCCTG TGATGGTGAC GCGCAACGAC TACGCGCTCG GTCTCTTTAA CGGCGACATC
GGTATTGCGC TGCCGGGCGC GAACGGCGCG TTGCGCGTGT ATTTCCGGAC CGGCGATGGC
GGCTTGCGAG CGGTATCGCC GGCGGCGCTG CCGCCCCACG ACACTGCGTT CGCGCTCACG
GTTCACAAAT CGCAGGGTTC GGAATTCGAG CACGCGGTGC TGATGCTGCC GTCGGTATTC
AGCCGGGTGT TGTCCCGCGA ACTGGTGTAC ACGGCGATCA CCCGCGCGCG CGAACGGGTC
GAAGTGATCG GCGCGCGCGC CGTGCTGGCG CAGGCCATTG CGACGCCTAC ACAGCGCGAC
TCCGGGTTAG CCGCGCGGAT AGCGGAGGTG TGGCGCGGCG TTGAATAG
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| Protein sequence | MSTFEQSASA PPELDDIGVS LPAPADFSIA LAEGFARRIG ALARRGGASA EAVKWAARSA
FAASRATAEG HVCVPLAILA RRFEASSAEV RTALFASGMA SDGSQSSAAL RPLVVDGQGR
LYLARYYDYE RRLARALVAH ARADEGVERL ANAQTLHERL LRYFGPPKDN EVDWQRVAAV
MALSGQLTIV SGGPGTGKTT TVVGVLACLL DARTDLRIAL AAPTGKAAQR MQEALLARAG
DLPPELAARL PQTSYTLHRL LGSGPGGRFR HHRDNPLPYD VVVIDEASMI DVAMAAHLLD
AIAPQTRLVM LGDKDQLAAV EAGAVFAELS ARPTFTQGGL QRIADALGID EKQLTQALPG
ASRGLGEEPT DFSAQSYVPN DDLFAYADSP GGFDEPPGGD LFESAAPPPS HIATASPMQN
PLADCVVWLE RNYRFGLESP IGRLSLAIRN GSASAALDVL RTDPTETCAA ALYEDTHATL
TERTVARLAA GFAPYADALA TALAAEAPDP LPLFDALNRF RILCATRSGP RGVDQVNAAM
AAQVRRAAGV TLAVGAQWFA GRPVMVTRND YALGLFNGDI GIALPGANGA LRVYFRTGDG
GLRAVSPAAL PPHDTAFALT VHKSQGSEFE HAVLMLPSVF SRVLSRELVY TAITRARERV
EVIGARAVLA QAIATPTQRD SGLAARIAEV WRGVE
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