| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1614 |
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| Symbol | |
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| ID | 6281871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1817974 |
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| End bp | 1821672 |
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| Gene Length | 3699 bp |
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| Protein Length | 1232 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621175 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_001895248 |
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| Protein GI | 187923606 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0364449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG CCATGAAGCA TCACGCGCTG GTCGCCGAGG AGCTCGACGT CTTCGCCTGT
TCGCTCGACG GCGTGAATCA GATCGAGGCG TCGGCGGGCA CCGGCAAGAC CTGGAATATC
TGCGCGCTGT ACGTACGGCT GCTGCTGGAA AAGAACCTGA ACGCCGATCA GATTCTCGTC
GTGACCTTCA CGAAGGCGGC GACCGCGGAG TTGCACGAGC GCATTCGCGG CCGTCTCGCG
GAATTGGATC GCGCTATCGA TATGGATGAC GACGGCGGCG ATCCGTTCAT CCGCCGGCTC
TTTGAAACGA CGCTGGCGCC GGAGCGGGGC ATCGCGCGCG AAGACGCGTT GAAAGTGGTG
CGGCGCGCGC TGCGCACTTT CGACCAGGCG GCGATCCACA CCATCCACGC GTTCTGTCAG
CGCGCGTTGC AGGAAGCGCC GTTCGCCGCG GCCATGCCGT TCGCCTTCGA AATGGAAGCC
GACGACGCGG CCTTGCGCTT CGAAATGGCG GCCGACTTCT GGCGTGAGCA GGTGGAACCG
GTGGCGCATG CGCATCCGGC GTTCGCCGCG TGGCTGGTGG CCAAACGCGC CGGTCCCGCG
TCACTCGACG AGCAACTCGC GCGTCGGTTG AAAAAGCCGC TGGCGCAGTT GCGCTGGGGC
AAGCTGGACG CAAACGGCAC GGGCGCCGAT CCGCAAGCCG GCTTCGACGC CGCGTGCGAG
GTATGGCATG CGGAGCGCGA TGCGATCGTC CGTTTGTTGG CCGAGGCGCA AGACCGTCTC
AGCAAGACGT CGCACAAGCC CGACCATGTG AGCGCCGCGA TCGCCGCATG GACCGAGTAC
TTCGCGCAGG GCGATTGTCA TGCGCCGCCG CCGAAGGCCG CGTTGAAGCT CACGGCTTCG
GCGTTGAAGA AGGCCACCAA GGTCAAGTTC GAGCCGCCCG AACATGCATT CTTCGAGCAT
GCCGAAGCGC TGGCGGCAGC CGTGGTCGCA GCCGAAGCCG CGCAACGCGC GCGCTGGCTC
TCGCTTGTGC AGACCTGGCT CGACTACGCG CCCGCCGAAC TGGTAGCGCG CAAACGCACG
CGCCGCGTGG TGTCGTTCGA CGATCTGCTG TCCAACCTGT ATCGTGCGCT CGCGGCGCAT
CCCTGGCTTG CCGATGCGTT GCGCACGCGT TATCCCGCCG CGCTGATCGA CGAGTTCCAG
GACACCGATC CGCTGCAGTT CGCGATCTTC AGCCGCATCT TCGCGCCGGC CGGCCCGCTG
TTTCTGGTCG GCGATCCGAA GCAGGCGATC TACAGTTTTC GCGCGGCGGA TCTGCATACC
TATCTGGCGG CGCGTGAGGC GGCTTCCGCG TGCTACACGC TGGCCGTCAA TCAGCGCTCG
ACCGCGCCCA TCGTCGAGGC GTGCAACCGG CTTTTCGAAG CCAACCAACA AGCGTTCGTG
CTGGAAGGTC TCGACTATCA GCCGGTGCGC GCGGGCGAAC GGCGCAGGCC GCCGTTTTCC
GACCCGGACG CGAGCGCTGG CGACTTCCGT ATCTGGACCT TGCCTCAAGG CGAGGCCGCG
TTGACCAAGC GCGAGGCCCA GCGTGAAGCG AGCGAAGCGT GTGCCGCCGA AATCGTGCGT
CTGCTGCGCG GCGCGCGCGA AGGCACGGTG ACGATCGGCG ATGAGCCGCT CGCGCCGGGC
AACATCGCGG TGCTGGTGCA AACGCATAAG CAGGGCAGTC TGATCAAACG CGTGCTGGCC
GCCTGGGGTG TCGGCAGCGT GGAGTTGGCG CAGGCGTCCG TGTTCGCTAC GCTCGACGCC
GAGCAGATCG AGCGCGTGCT GGCCGCCGTC GATACACCCG GCGACCTGCG CCGTCTGCGC
GCGGCGCTCG CCACCGATTG GCTGGGCCTC GACGCCGCCG CGTTGTGGCG TCTCGAGCAG
GTCGCCGACG CGCCATCGGT TGCCGACGAT CCCGCGCACG CCGCCGACGC GATGGGCTGG
GTCGAACGTT TTTCGCGCTA TCGCACGTTG TGGCATGAGC GCGGCTTCGC GGTGATGTGG
CGCACGCTGA TGCGTGAACT GCGCGTCGCG CAACGCCTGG TTGCGGCAGC GGATGGCGAA
CGTCGTCTGA CGAACGTGAA TCACCTGGCC GAACTCGTGC AGGCGCGCGC CGCCACGCAG
CCGGGCATCG CGCCGACCTT GCGCTGGCTC GCCGCGCAAC GCACGCAGGG CGGTGGCGAA
GACGCGCAGT TGCGGCTCGA GTCGGACCGC AACCTCGTGC AGATCGTCAC GGTCCACAAA
TCGAAAGGGC TCGAATATGC GGTGGTGTTC TGTCCGTTCC TGAACGACGG CGGGTTGCGC
GAGCCGCCGT CGTCCGGTCT GCCGGATGCG CGCGAGTATC ACGACGAAAC CGGCGACGCG
GTGCTGCACT ACGGTTGCGA CGACGAAGAA GCCGAGCACG CATCGCGCTA CGCAGTGCGC
GAACAGGCGG CGGAACGGGC GCGGCTCGTC TACGTGGCGT TGACGCGCGC GGTGTACCGC
TGCTATCTGG TGGCTGGTAC GTATCAGTCC TCGCGCTCCA CGAAAGAGTC GCGCCGCAGC
GTGTTGAACT GGCTGGTGGC CGGCGAGGGT CACGACTTCG GCGACTGGCT TGCCGAGCCG
CCCGACGAAG CCGCCTTGTC GGCGCGTTGG CAGGCACTGG CGGGCGGGCC GGTCACCCTC
GCCGCGCTGC CGAAGCCGGC GCGCCGCGTG CCGCTCGAAA GCCTTCTGGA CCGCAGTGCG
CGGATGCAGG CGCGGGCCAA TCGCAGGCCG TTGCGCGACC AGTGGCGCAT GGCGAGTTTC
AGCGGGCTGA TCGCCGCCGG CAGTAAGAGC GAGGAGACGC ACGCGCCGGT GGAAGAAGTG
CGTCCCGATC ACGACGAGAT AGCCGATGCG CTCGCTGTCA CGTCCACGCT CGCGCCCGCG
CCGCAGGCGC CGGTCTACGC CGAGGACGAC ATTCTCGCGT TTCCGCGCGG CGCCGCTGCG
GGCGACTGTC TGCACCGCAT GTTCGAACTC GCTGATTTTT CGGAGCCGCA TACATGGACC
GACGCCATTC GCGGCGCGTT GCGCGAGCGT CCGGCGCCGG CTGTGTCTGA ACTCGCCGCA
CACCTGCCGG CGATGATGCA CAACCTGCTC AGAGACGTGG TCACCGCCGA ACTGCAGCCC
GGCATGACGC TCGCCCGGCT GAATCCGCGC CGGCGCCTGA ACGAACTCGA GTTTCTGTTC
GCCGCACCGT CGCTGGATTT CCCTGCGTTG CGCGAACTGT TGATCGAGCA TGGCTATCCC
GACGTCGCAC TGGAACCCGG CGTGCTGCGT GGGTTCGTCA AAGGATTTAT CGACATGATC
GTCGAGTACG ACGGACGTTT CTGGATCGTC GACTGGAAGT CGAACCATCT GGGCGACACC
GCTGCCGACT ACGCCGCCGC GCCTCTCGAA GCGGCCATGG CGAGTCACGC GTATCACCTG
CAGGCGCTGC TTTATACGGT CGCGCTGCAT CGCTATCTGA GAACGCGGGT GCGCGATTAT
TCGTACGACA CGCATATCGG CGGTTATCTG TATCTGTTCG TGCGCGGCGT GCGTCCGCAT
TGGCGCGACG CCGACGGACC GGCGGGCGTG CACATGCGGC GGCCCGCATT CGAACTGGTT
GCGTTGCTCG ATGCGGCCAT GATCGGGGGT GTTGCATGA
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| Protein sequence | MSGAMKHHAL VAEELDVFAC SLDGVNQIEA SAGTGKTWNI CALYVRLLLE KNLNADQILV
VTFTKAATAE LHERIRGRLA ELDRAIDMDD DGGDPFIRRL FETTLAPERG IAREDALKVV
RRALRTFDQA AIHTIHAFCQ RALQEAPFAA AMPFAFEMEA DDAALRFEMA ADFWREQVEP
VAHAHPAFAA WLVAKRAGPA SLDEQLARRL KKPLAQLRWG KLDANGTGAD PQAGFDAACE
VWHAERDAIV RLLAEAQDRL SKTSHKPDHV SAAIAAWTEY FAQGDCHAPP PKAALKLTAS
ALKKATKVKF EPPEHAFFEH AEALAAAVVA AEAAQRARWL SLVQTWLDYA PAELVARKRT
RRVVSFDDLL SNLYRALAAH PWLADALRTR YPAALIDEFQ DTDPLQFAIF SRIFAPAGPL
FLVGDPKQAI YSFRAADLHT YLAAREAASA CYTLAVNQRS TAPIVEACNR LFEANQQAFV
LEGLDYQPVR AGERRRPPFS DPDASAGDFR IWTLPQGEAA LTKREAQREA SEACAAEIVR
LLRGAREGTV TIGDEPLAPG NIAVLVQTHK QGSLIKRVLA AWGVGSVELA QASVFATLDA
EQIERVLAAV DTPGDLRRLR AALATDWLGL DAAALWRLEQ VADAPSVADD PAHAADAMGW
VERFSRYRTL WHERGFAVMW RTLMRELRVA QRLVAAADGE RRLTNVNHLA ELVQARAATQ
PGIAPTLRWL AAQRTQGGGE DAQLRLESDR NLVQIVTVHK SKGLEYAVVF CPFLNDGGLR
EPPSSGLPDA REYHDETGDA VLHYGCDDEE AEHASRYAVR EQAAERARLV YVALTRAVYR
CYLVAGTYQS SRSTKESRRS VLNWLVAGEG HDFGDWLAEP PDEAALSARW QALAGGPVTL
AALPKPARRV PLESLLDRSA RMQARANRRP LRDQWRMASF SGLIAAGSKS EETHAPVEEV
RPDHDEIADA LAVTSTLAPA PQAPVYAEDD ILAFPRGAAA GDCLHRMFEL ADFSEPHTWT
DAIRGALRER PAPAVSELAA HLPAMMHNLL RDVVTAELQP GMTLARLNPR RRLNELEFLF
AAPSLDFPAL RELLIEHGYP DVALEPGVLR GFVKGFIDMI VEYDGRFWIV DWKSNHLGDT
AADYAAAPLE AAMASHAYHL QALLYTVALH RYLRTRVRDY SYDTHIGGYL YLFVRGVRPH
WRDADGPAGV HMRRPAFELV ALLDAAMIGG VA
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