| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1606 |
|---|
| Symbol | |
|---|
| ID | 6282673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1805842 |
|---|
| End bp | 1806297 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642621167 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_001895240 |
|---|
| Protein GI | 187923598 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACGA GTAGCCGGTT TGCATTCGCG GTGCATGTGC TCGCGCTGCT GTCGTTGCAG
GAAGGCGCGC CGTTATCGTC GGAGATGATT GCTGGCAGCG TGAATACGAA TCCCGCGCTG
ATCCGGCGGC TTTTGAGCAT GCTGGCGGAA GCGGGCCTCA CCACCTCGCA GCTCGGCGCG
GGCGGTGGCG CGTTGCTGGC GCGGGCGCCG GAGCAGATCA CGCTGCTTGA GGTGTATCGC
GCGGTAGACG ACGCGCAGTT ATTTGCGTTG CATCGCGAGG AGCCGAATCC CGCGTGCATG
GTCGGACGCA ATATCCAGGG CGTACTGCGC GGCATCATCG ACGAAGCGCA GCAAGCCATG
GAAGCCGCGC TCGACGCGCG CACGCTGGCC GATGCCACGG CCGACGTGGT GCGTGCGGAG
AAGCAGCGCG AACGCAAGAA GCGCTCGCAC GGGTGA
|
|---|
| Protein sequence | MNTSSRFAFA VHVLALLSLQ EGAPLSSEMI AGSVNTNPAL IRRLLSMLAE AGLTTSQLGA
GGGALLARAP EQITLLEVYR AVDDAQLFAL HREEPNPACM VGRNIQGVLR GIIDEAQQAM
EAALDARTLA DATADVVRAE KQRERKKRSH G
|
|---|
| |