| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1590 |
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| Symbol | |
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| ID | 6284735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1788580 |
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| End bp | 1789515 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621151 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001895224 |
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| Protein GI | 187923582 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.31335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCA AAGTGTTCGA TACGAAGGAA GTGCAAGACC TGCTGAAAGC TGCTGCCAAC
GTGGGCAGCC AGGACGGCGG GGCTCGCGCA AAGCAGATCG TCAATCGCCT GCTCGGCGAC
CTGTTCAAGG CCATCGACGA CCTCGACATG ACGCCCGACG AAATCTGGGC CGGCGTCCAC
TACTTCAACA AGCTCGGACA GGACGGCGAA GCTGCGCTCT TGGCTGCCGG TCTCGGTCTG
GAGAAATACC TCGACATCCG CATGGACGCG GAAGACAAGG CGGCTGAAAT TACCGGCGGC
ACGCCGCGTA CCATCGAAGG TCCGCTGTAT GTCGCCGGTG CGCCCGTGCG CGAAGGCGTG
TCGAGAATCG ATATCGATCC GGACGAGGAC GCCGGCCCGC TGGTGATCCG CGGCACGGTG
ACCGGCCCGG ATGGCAAGCC CGTCGCGGGC GCGCTGGTCG AATGCTGGCA CGCTAATTCG
AAAGGCTTCT ATTCGCACTT CGACCCGACC AGCAAGCAGA GCGAATTCAA TCTGCGCGGC
GCGGTTAGCA CCGGCGCCGA CGGCAAGTAC GAGTTCCGCA CGCTCATGCC GGTAGGCTAC
GGTTGCCCGC CGCATGGCGC GACCCAGCAA CTGCTGGACG TGCTCGGCCG CCATGGCAAC
CGTCCGGCGC ACGTGCACTT TTTCGTCACG GCCGACAAGT CCCGCAAGCT GACGACGCAG
ATCAATATCG AGGGCGACCC GTTGATCTGG GACGACTTTG CTTACGCCAC TCGCGAGGAT
CTGATTCCTC ACGTGGTTGA AAAGACCGGC GGCACCGCGC TGGGAATGAA GACCGATGCG
TATAAGGAAA TCCAGTTCGA CATCGAGTTG ACTCCGCTGA TTCAGGGCAA GGATAACCAG
CTGGTGCATC GTCCGCGTGT GTCTGTCAGC GCCTGA
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| Protein sequence | MSVKVFDTKE VQDLLKAAAN VGSQDGGARA KQIVNRLLGD LFKAIDDLDM TPDEIWAGVH
YFNKLGQDGE AALLAAGLGL EKYLDIRMDA EDKAAEITGG TPRTIEGPLY VAGAPVREGV
SRIDIDPDED AGPLVIRGTV TGPDGKPVAG ALVECWHANS KGFYSHFDPT SKQSEFNLRG
AVSTGADGKY EFRTLMPVGY GCPPHGATQQ LLDVLGRHGN RPAHVHFFVT ADKSRKLTTQ
INIEGDPLIW DDFAYATRED LIPHVVEKTG GTALGMKTDA YKEIQFDIEL TPLIQGKDNQ
LVHRPRVSVS A
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