| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1577 |
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| Symbol | |
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| ID | 6281639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1777651 |
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| End bp | 1778955 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621141 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001895214 |
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| Protein GI | 187923572 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.321925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAGC GGCACCGCGG CCGTAATATC GCGTTGATCA TCGCCGCACT GGTCATCCTC
GGCGTGGTGC TGTGGCGCTG GCATCCATGG GGCGGTCCCG GCGGCGGCGC GAGCGGCGCG
GCCGGCGCCA GCGATGCGAG CGGCGCCCGC GCCGGGCGCG CTGGCCGAGG TGGCGCGATG
GGCAATATGC CGCAGCCGGT TCACGTGGCT GCCGCGACGC AGGGCGAGAT GCCGGTGGTG
CTAACCGCCC TCGGCACGGT CACGCCGCTG GCCAACGTCA CCGTGCTGCC GCAGTTGAGC
GGCGTGTTGC AGGAGGTGTA TTTCAAGGAA GGCCAGATGG TCAAGAAGGG CGACGTGCTG
GCCCAGATCG ACCCGCGCCC GTATCAGATC TCGCTCGACA ACGCGCAAGG CACGCTCGCC
CGCGACGAGG CCCTGCTGCA AACCGCCCGC CTCGACCTGA AGCGCTACCA GACGCTGCTC
TCGCAAGACT CCATCGCCAG CCAGCAGGTG GATACGCAGG CCTCGCTGGT GCGTCAATAC
GAAGGCACGG TGAAGTCCGA CAAGGCCAAC GTCGACACCT ACAAGCTCGA CCTCGTCTAC
GCGCGCATTA CGGCCCCAGT GTCGGGGCGC GTCGGTTTGC GCCAGGTCGA CCCGGGCAAC
TACGTGACGC CGAGCCTCAC TAACGGCATC GTGGTGATTA CGCAATTGCA GCCGATTAGC
GTGATCTTCA CGACCTCTGA GGACAACCTG CAACAGATCA TCCAGCAGAC CCAGTCGGGC
GCGAAGCTCT CGGTCACGGC GTATGACCGC AGCAATACCA CGTCGCTCGA AGGCGGCATG
CTCGAAACGC TGGACAACCA GATCGACACC ACCACCGGCA CGGTCAAGCT GCGCGCGATC
TTCCAGAACA GCAAGAACCT GCTGTTCCCC AATCAGTTCG TGAATACGCG CCTGCTGGTC
GATACGATCA AGGACGCCGT GATCGTGCCG ACGCCGGCCG TGCTGAACGG CTCGATGGGA
CAGTTCGTGT ACGTCGTGAA GGCGGATAAC ACGGTGACCG TGCGACCGGT CAAGATCGGC
CCCGTGGATG GCGAACGCAC CAGCATCAAG TCCGGCCTGG CGGTGGGCGA GCGCGTCGTG
ATCGACGGTT CGGACCGCCT GAAGGAAGGC GCGAAAATCA CGATTCCGGC CGACAAGCCG
CGCGGCGCAT CGGGTGCCCG TGGGGCAAGC GGCGCGGCCG CTTCATCGGG CGCATCTGGC
GCCCACGCGC ATCATGGCAA ACACGCGGCG CAAGCCTCGC AATAA
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| Protein sequence | MVKRHRGRNI ALIIAALVIL GVVLWRWHPW GGPGGGASGA AGASDASGAR AGRAGRGGAM
GNMPQPVHVA AATQGEMPVV LTALGTVTPL ANVTVLPQLS GVLQEVYFKE GQMVKKGDVL
AQIDPRPYQI SLDNAQGTLA RDEALLQTAR LDLKRYQTLL SQDSIASQQV DTQASLVRQY
EGTVKSDKAN VDTYKLDLVY ARITAPVSGR VGLRQVDPGN YVTPSLTNGI VVITQLQPIS
VIFTTSEDNL QQIIQQTQSG AKLSVTAYDR SNTTSLEGGM LETLDNQIDT TTGTVKLRAI
FQNSKNLLFP NQFVNTRLLV DTIKDAVIVP TPAVLNGSMG QFVYVVKADN TVTVRPVKIG
PVDGERTSIK SGLAVGERVV IDGSDRLKEG AKITIPADKP RGASGARGAS GAAASSGASG
AHAHHGKHAA QASQ
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