Gene Bphyt_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1573 
Symbol 
ID6281218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1768967 
End bp1769431 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content58% 
IMG OID642621137 
Productputative signal peptide transmembrane protein 
Protein accessionYP_001895210 
Protein GI187923568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.182426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC TCGTTGCGTT GATTGCGCTG ATCGCGCTGG GGTATGGCGC CGTGCAGGCG 
TTTGATGCCT TGCAGGCGGC TTTTGGGCGG GGTGTTGCTG TTGGCGTTGG TGTGCTGGTG
GCTTTGCTGC TGATGGCCGC GGTGGGTTAT TGGTGGCGAC GCCGCAAGGA AGTGGCTTCC
AACGTTCGTG ATGGAGATTG GACTCACAAA CTCAAGGGCA GTTGGGGGAT GGTGCGGCTG
GCTGCCGGCA AGCGGTTATG TGAGATCCGT CTCGGTGAAG AGCAGGGGGC TTATATTTTC
GCTGATTTGC TCGGGGCGGA GGTGCAGGGC CATGATGCTC AATGGCAGGT TGCTTTGAAG
GTCAAAGATG CCAGGCATCA AACTTGGGTC TTGCCTATGC GGAATGAGCG GCAGGCTAAA
CAATGGGCGC GGATTTTGGT GCTCGCTGTG GAACAGAAGC TTTAG
 
Protein sequence
MPILVALIAL IALGYGAVQA FDALQAAFGR GVAVGVGVLV ALLLMAAVGY WWRRRKEVAS 
NVRDGDWTHK LKGSWGMVRL AAGKRLCEIR LGEEQGAYIF ADLLGAEVQG HDAQWQVALK
VKDARHQTWV LPMRNERQAK QWARILVLAV EQKL