| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1571 |
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| Symbol | |
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| ID | 6281216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1766748 |
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| End bp | 1768085 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621135 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001895208 |
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| Protein GI | 187923566 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.256124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC GCCATCACGC CAAGGCCGCT GCCCGGCATA ACGAGGTGCT CGACGCAGCT
GCCGACGGCG CCGAATCGTG GCGCGCCACG CAGTTCGTGT ATCTGGGCCG TCAACCGATC
CTCGATCGCG ACGGCGCGCT CAACGCTTAC GAATTGTTGT TTCGAGCCGG CGCGCATAAC
TACGCCGAAG TCACCGACGA CGCCCAGGCG ACCGCGCAGG TGGTGGCGCG CGCGATCGGC
GGAATCGGCG TGCCGACCGT GCTGGGCCAG CATCGCGGGT TCGTCAACAT CGACCGCGCG
CTGCTCTTTA ACGACATCGT CCATCTGATG CCGCCCGAGC GCTTCGTGCT CGAGATCCTC
GAGACTGTGA AATTCGACGC GCAGCTGGTG CGCCGTCTGG GCGAATTGCG CCGCGCCGGT
TTTCAGGTGG CGCTCGATGA CGTCAGCGAA CTGTCCGACG AGCTGAACGG CGCGCTGCCG
CATGCCGACA TCGTCAAGAT CGACTTTCTG CAAACTGACC GTGCCGTGCT GCCGAAGCTG
GCGTCGCTGG TGCGCGGGCA GGGCAAGACG CTGATCGCCG AGAAGGTCGA GACGCGCGAG
GATTTTGCGC TAGCGCGCGA CCTCGGCTTC GATCTGTTCC AGGGGTACTT TTTCGCGCGG
CCGCAGGTGC TGGCCGCGCC GCGCAACCGC TCGCCGCGGC CGGGGTTGCT GCGCCTCCTG
GCGTTGCTGT CGCGCGATGC CGGCATCGTC GAACTCGAAG CGGAGCTCAA GCTGAACCCG
AGCGTGGTGG TGCAGCTGCT GCGCCTCGTC AATTCGAGTG CGTTCGGGCT GGGGCGCAAT
ATCGCGTCGT TGCGCGAGGC GATCATTGCC ACCGGCACAC GGCAGATCGC GCGCTGGGCG
CAACTGCTGC TGTATGCCGA TAGCGGCGAG CTGCCATGGC GCGCCGATCC GCTGGTGCAA
CTGGCGGGCA CGCGTTCGCG ATTCATGGAG CTGGCGGCCG CCTGGCTGCG TCCCGCCGAC
GACGATTTCG CCGATGCGGC CTTCATGACC GGGATTTTTT CGCTGATCCA CGTGGTGCTC
GGCAGCACGC CGGGCGCGGC GCTGGAGAAA CTCGGCCTCG CGCCGCAGAT TCGTGAAGCG
ATCGTGTCGC GGCGCGGCGA GCTCGGCACC TTGCTGCGTC TCGCCGAGGC GGCGGGCGAG
GGCCTCGACG CGGCATCGAT CGCGCTGGGC CCCGATGCGC CGACCGGCTT CGTAGCCTTT
ACGCCCGAGG TGCTGGCCGA GCTGAACCTG TCGGCCGCGG CCTGGTTCGG CGCGCATATC
GAGGTAGCGA TCGCCTGA
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| Protein sequence | MSERHHAKAA ARHNEVLDAA ADGAESWRAT QFVYLGRQPI LDRDGALNAY ELLFRAGAHN
YAEVTDDAQA TAQVVARAIG GIGVPTVLGQ HRGFVNIDRA LLFNDIVHLM PPERFVLEIL
ETVKFDAQLV RRLGELRRAG FQVALDDVSE LSDELNGALP HADIVKIDFL QTDRAVLPKL
ASLVRGQGKT LIAEKVETRE DFALARDLGF DLFQGYFFAR PQVLAAPRNR SPRPGLLRLL
ALLSRDAGIV ELEAELKLNP SVVVQLLRLV NSSAFGLGRN IASLREAIIA TGTRQIARWA
QLLLYADSGE LPWRADPLVQ LAGTRSRFME LAAAWLRPAD DDFADAAFMT GIFSLIHVVL
GSTPGAALEK LGLAPQIREA IVSRRGELGT LLRLAEAAGE GLDAASIALG PDAPTGFVAF
TPEVLAELNL SAAAWFGAHI EVAIA
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