| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1569 |
|---|
| Symbol | |
|---|
| ID | 6281214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1763072 |
|---|
| End bp | 1764529 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642621133 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_001895206 |
|---|
| Protein GI | 187923564 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.193667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAGG CGGCGGTGCT CGACCGGCTC TGGACGCGAA TGAGCGAGCG CGGCGATTTC
CCCATGCTGT CGCAGTCGCT GCGCTCAACC ATGGCGGCGA TGAACAATGA CGACCTCGAC
TTCACTGGCC TCGTGCAGGT GGTGCTGTCC GACTTCGCGC TCACGCAAAA AGTGTTGCGG
CTTGCCAACT CGGCCATGTA CATGGCGTTC GGCGGCAACA TCACCACCGT GTCGCGCGCG
TTGATGGTGC TCGGCATGGA CGCGGTCGGC CATCTGGTGG TCGGCCTGAA AATAGTCGAT
CACTTCCATC ACAGCGCACC GCGCCGCATC GACGCGAAAC TCGAACTGAA CCGCACGCTG
CTGTCGGGCT GCGTCGCGCG CAAGCTGACC GAGCGCGGCG ATCTGCGCGC CGGCGAGGAA
GCCGTGGTCT GCACGCTGAT GCGGCAGATC GGCAAGCTGC TGGTGGTGTT CTATCTCGAC
GCCGAATGGG ATCAGATTCG CCGCCATATC GACGACGGCG CGCTCGAAGC CGATGCCTGC
GTGCTGGTGC TCGGCGTCAC GTTCGACGAA ATCGGCGCCG AAGCCGCCGT GCGCTGGCGC
CTGCCCGACA TGATCCGCTC CGGCATGGGC GAGTTCGATC CGCAAGACGT CACGCAGCCG
CGCCAGGTGC AATGGCTGCG CGCCATCACC AATTACTCCA CGGCGGTCGC CGACGTGCTC
ACCCAGCAGA ACATGCCGGA CTGGGAGCGC GAGGAACGCA TCGCCGAACT GGCGCAGGAA
TATAGCGGCG CGCTCAACAC TGATCCCGAG GTGCTGCTCC AGATGAGCGT GGCGCTCGCC
CGCGAAGAAG GCGGCGACGG CGTGATGCGC GAAATCGTCG AGCTGCGCGC CAACGCGGAC
GCGATCGCGC GCGAGGCGCT CAGCCCCGAA GCGCGCATCG CGGTGGGCGT GCAGGATCTA
CGCGGCCTGC CGGAAAGCAG CCCGTTGGCG CCGGCACTGG CGCTGGCCGC GGAAACACTG
CTCGCCGGCC TGGGCTTTGC GCGCACGGTG GTGTTCGTCA AGCACAGCAA CGGCACCTTC
AAGGCGCGCC TCGGTCTCGG ACCGAAGATC GACGCGGCGT TGCCCAAGCT AACCTTTAAC
ACGGCTTTCG AGCCCGACGT GTTTCATCTG GCGATCGCGA ACTCGGTGGG CATCTTCATC
GAGAATGCGC GCGATCCGAA GATGGTCGCG CGGCTGCCCG AATGGTTCCG CCGCTCCTTC
GACGACGCCC GCGCCTTCGT GCTGCTGCCT GTCGTCGATG AAAGCGAGAC AACTGTCGCG
CTGCTCTACG GCGACTGGTC GCATAGTCAG GAGCCACGGC GCATCTCACA GAAAGAGATG
AGCGTGTTGA ATGAACTGGC CAAGGAGTTA GGCCGTTTTT TCGGCCTGGG GCAGATGCGG
GAAATGGAGA CGATGTGA
|
|---|
| Protein sequence | MVKAAVLDRL WTRMSERGDF PMLSQSLRST MAAMNNDDLD FTGLVQVVLS DFALTQKVLR
LANSAMYMAF GGNITTVSRA LMVLGMDAVG HLVVGLKIVD HFHHSAPRRI DAKLELNRTL
LSGCVARKLT ERGDLRAGEE AVVCTLMRQI GKLLVVFYLD AEWDQIRRHI DDGALEADAC
VLVLGVTFDE IGAEAAVRWR LPDMIRSGMG EFDPQDVTQP RQVQWLRAIT NYSTAVADVL
TQQNMPDWER EERIAELAQE YSGALNTDPE VLLQMSVALA REEGGDGVMR EIVELRANAD
AIAREALSPE ARIAVGVQDL RGLPESSPLA PALALAAETL LAGLGFARTV VFVKHSNGTF
KARLGLGPKI DAALPKLTFN TAFEPDVFHL AIANSVGIFI ENARDPKMVA RLPEWFRRSF
DDARAFVLLP VVDESETTVA LLYGDWSHSQ EPRRISQKEM SVLNELAKEL GRFFGLGQMR
EMETM
|
|---|
| |