| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1568 |
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| Symbol | |
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| ID | 6281213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1761553 |
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| End bp | 1762935 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621132 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001895205 |
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| Protein GI | 187923563 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA TCGCAATCGA GAATCCGGGC CACACGGGTG CAGCGGACGA TGCGCAATTG
AATGCCAGCT TCGCGCGGCA GCCTATTCTG AACCGCGACG GCATGCTGTG CGGCTACGAG
ATCAAGGTGC GCGCACCGGA ATGTGCCGCG CAGACGGCGG ACGCCGCGCA TGCCGCCGTG
CATGCCGCCG TGCATGAGAA CAGCGACGCC GACGCGGCAT CGCCCCGCGC GCCCGATCCG
GCGCAACGCG TGGCGCGAGC CATCCTTCAC GGCCTGCTGC AGGGCAATGT GCGCGGCGCG
CTGACCGGGC ATCCGGCCTA CGTCGACGTC AGCCGCGAGA TGCTCTTCGA CGAGGCGATC
CTGCGGCTGC CCGCCGAGCG CTTCATGCTC GAACTGGCGC CCACCATCGA GGTCGACGAG
GCGCTGGTGG CGCGCATCGT CCAGTTGCAT GGGCGGCGCT ATCGTTTCGT GCTCGACGAG
GTGACCCAGC CCAACGAAGC CTTCGCCAAA CTGTTGCCCT ACGCCGAAGT CGTCAAGATC
GATTTCATGC ACGCGCCGCG CGCGCTGCTG CCGAAACTGG CGAGCGTGCT CAAGTCGGCG
GGCAAACTGC TGGTCGCCTC GGGCATCGAC GCGCAGGCCG ATTTCGAAAC GGCGCATGGA
CTCGGGTTCG ATCGCTTTCA GGGTTACTTC TTCGCGCGCG CGCAGACCTC GACGACGCGC
CGCGTCAGCG CGCCGCGCCA TGCGTTGCTG AACCTGCTGC AACTCCTCTC GGGCGATCCG
ACCGTCGCAC AGCTCGAAGC CGAACTCAAG CTGAACCCGG TGCTGGTGAT GCACCTGATG
AAGCTCGCCA ATTCGAGCGG CCTCGCCGTC GGCCACAAGG TCACGACGCT GCGCGAGGCG
ATCAACGCGA CCGGCACCAA CCGCATCGCG CGCTGGACGC AGCTGCTGCT CTACGCCGAC
GGCCGCAAGG TCGCCCTCGA AGACGATCCC CTGCTGCAAC TTGCCGCGAC GCGCGCGCGC
TTCATGGAAC TGGCGATCGA GCGCCTGCCC GAAGCCGGTC GCGACGAAGC CGATGCGGCG
TTTCTGACCG GCGTATTTTC ATTCGTCGAC GCGGTGTTCG GCGGCTCGCT CGAAAGCACC
TTGAACCTGC TGACGTTGTC GCGTCCGATC CAGGCGGGCA TCCTGCATCG GCAGGGCGTG
CTGGGCTTGC TGCTGAGCGC GGTCGAAGCG CTCGAACGCG GCGCGTGGGA TGAGATCGGC
ACGCTGTGCG AACGCCTGCA GCCGTTGACG GTGGAGGAGG TCGCGGAACT GGGTCTGGCG
GCCGGCGCGT GGGCCGGCGT CGCCGACCGC AGCGCGGAAG GGCTGGAAAG AATCGAGGAC
TGA
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| Protein sequence | MTTIAIENPG HTGAADDAQL NASFARQPIL NRDGMLCGYE IKVRAPECAA QTADAAHAAV
HAAVHENSDA DAASPRAPDP AQRVARAILH GLLQGNVRGA LTGHPAYVDV SREMLFDEAI
LRLPAERFML ELAPTIEVDE ALVARIVQLH GRRYRFVLDE VTQPNEAFAK LLPYAEVVKI
DFMHAPRALL PKLASVLKSA GKLLVASGID AQADFETAHG LGFDRFQGYF FARAQTSTTR
RVSAPRHALL NLLQLLSGDP TVAQLEAELK LNPVLVMHLM KLANSSGLAV GHKVTTLREA
INATGTNRIA RWTQLLLYAD GRKVALEDDP LLQLAATRAR FMELAIERLP EAGRDEADAA
FLTGVFSFVD AVFGGSLEST LNLLTLSRPI QAGILHRQGV LGLLLSAVEA LERGAWDEIG
TLCERLQPLT VEEVAELGLA AGAWAGVADR SAEGLERIED
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