Gene Bphyt_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1567 
Symbol 
ID6281832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1760531 
End bp1761289 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content62% 
IMG OID642621131 
Productacetoacetate decarboxylase 
Protein accessionYP_001895204 
Protein GI187923562 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4689] Acetoacetate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.984324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA AAAGCGTGCT GTCAAATGCC TTCGCCATGC CGATCACGAG CCCGGCATTC 
CCCATGGGCC CGTACCGGTT CATCAACCGC GAATTTCTGA TCATCACCTA CCGCACCGAT
CCGGACAAAC TGCGCGCCGT GGTGCCCGAA CCACTCGAAA TCGGCGAGCC GCTGGTGCAC
TACGAGTTCA TCCGCATGCC GGACTCGACG GGTTTCGGCG ACTACACGGA AAGCGGCCAG
GTGATCCCGG TGTCGTACAA GGGCGTGGCG GGCGGCTACA CGCTGGCTAT GTATCTAGAC
GACCATCCGC CCATCGCCGG CGGCCGCGAA CTGTGGGGCT TTCCGAAGAA GCTCGCGAAT
CCGGTGCTTG CGGTTCATAC CGACACGCTC GTCGGCACGC TCGACTACGG TCCGGTGCGC
ATCGCCACCG GCACGATGGG CTACAAGCAT CGGCAGCTCG ATCTGGCGCA GCAGAAAAAG
CGCCTCGAAA CGCCCAACTT TTTGCTCAAG GTGATTCCGC ATGTGGACGG CACGCCGCGC
ATCTGCGAAC TGGTGCGCTA CTACCTGCAG GACATCGATC TGAAAGGCGC ATGGACCGGG
CCGGCCGCGC TCGAACTGGC GCATCACGCG CTCGCGCCGG TTGCGGAATT GCCGGTGCTG
GAGATCGTCG AGGCGCGCCA TCTGCTTGCC GATCTAACGC TCGGTCTCGG CGAAGTGGTA
TTCGATTATC TCGATCAGCC GGAAGCGAAC GCGCGTTGA
 
Protein sequence
MDVKSVLSNA FAMPITSPAF PMGPYRFINR EFLIITYRTD PDKLRAVVPE PLEIGEPLVH 
YEFIRMPDST GFGDYTESGQ VIPVSYKGVA GGYTLAMYLD DHPPIAGGRE LWGFPKKLAN
PVLAVHTDTL VGTLDYGPVR IATGTMGYKH RQLDLAQQKK RLETPNFLLK VIPHVDGTPR
ICELVRYYLQ DIDLKGAWTG PAALELAHHA LAPVAELPVL EIVEARHLLA DLTLGLGEVV
FDYLDQPEAN AR