Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1567 |
Symbol | |
ID | 6281832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1760531 |
End bp | 1761289 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621131 |
Product | acetoacetate decarboxylase |
Protein accession | YP_001895204 |
Protein GI | 187923562 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4689] Acetoacetate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.984324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCA AAAGCGTGCT GTCAAATGCC TTCGCCATGC CGATCACGAG CCCGGCATTC CCCATGGGCC CGTACCGGTT CATCAACCGC GAATTTCTGA TCATCACCTA CCGCACCGAT CCGGACAAAC TGCGCGCCGT GGTGCCCGAA CCACTCGAAA TCGGCGAGCC GCTGGTGCAC TACGAGTTCA TCCGCATGCC GGACTCGACG GGTTTCGGCG ACTACACGGA AAGCGGCCAG GTGATCCCGG TGTCGTACAA GGGCGTGGCG GGCGGCTACA CGCTGGCTAT GTATCTAGAC GACCATCCGC CCATCGCCGG CGGCCGCGAA CTGTGGGGCT TTCCGAAGAA GCTCGCGAAT CCGGTGCTTG CGGTTCATAC CGACACGCTC GTCGGCACGC TCGACTACGG TCCGGTGCGC ATCGCCACCG GCACGATGGG CTACAAGCAT CGGCAGCTCG ATCTGGCGCA GCAGAAAAAG CGCCTCGAAA CGCCCAACTT TTTGCTCAAG GTGATTCCGC ATGTGGACGG CACGCCGCGC ATCTGCGAAC TGGTGCGCTA CTACCTGCAG GACATCGATC TGAAAGGCGC ATGGACCGGG CCGGCCGCGC TCGAACTGGC GCATCACGCG CTCGCGCCGG TTGCGGAATT GCCGGTGCTG GAGATCGTCG AGGCGCGCCA TCTGCTTGCC GATCTAACGC TCGGTCTCGG CGAAGTGGTA TTCGATTATC TCGATCAGCC GGAAGCGAAC GCGCGTTGA
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Protein sequence | MDVKSVLSNA FAMPITSPAF PMGPYRFINR EFLIITYRTD PDKLRAVVPE PLEIGEPLVH YEFIRMPDST GFGDYTESGQ VIPVSYKGVA GGYTLAMYLD DHPPIAGGRE LWGFPKKLAN PVLAVHTDTL VGTLDYGPVR IATGTMGYKH RQLDLAQQKK RLETPNFLLK VIPHVDGTPR ICELVRYYLQ DIDLKGAWTG PAALELAHHA LAPVAELPVL EIVEARHLLA DLTLGLGEVV FDYLDQPEAN AR
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