| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1566 |
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| Symbol | |
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| ID | 6281831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1759642 |
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| End bp | 1760436 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621130 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001895203 |
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| Protein GI | 187923561 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA ATTGGCGAAA CATAGCTGCG CTCGCGCTGT TCGCGGCGGC ATCGGCAACG
GCCGGCACCG CTGCGGCGGC CGATATCAAG GAAGTGCATT TCGGCGTCGA GGCGTCGTAT
GCGCCGTTCG AATCGAAGTC GCCGTCGGGC GAGCTGCAGG GTTTCGACAT CGACGTCGGC
AATGCCGTAT GCGCGAAGCT GAAGGCCAAA TGCGTGTGGG TCGAGAATTC GTTCGACGGT
CTGATCCCGG CCTTGCAGGC GCGCAAGTTC AACGCCATCA ACTCGGACAT GACGATCACG
GATCAGCGCC GTCAGGCGGT CGACTTCACG GATCCGATCT ACACCATCCC GAATCAGATG
ATCGCGAAGA AGGGCAGCGG TCTGCTGCCG ACGCCGGCCT CGCTCAAGGG TAAGCATGTC
GGCGTGCTGC AAGGCACGAT TCAGGAAACT TACGCGAAAG CGCGTTGGGC GCCGGCCGGC
GTCGACGTCG TGCCGTATCA GACGCAGGAT CAGATTTACG CCGACCTCGC TTCGGGGCGT
CTCGACGCTG CCTTCCAGGA CGCGGAAGCC GCGTCGAAGG GCTTCCTGAA GAAGCCGCAA
GGCGCGGGCT TCGAGTTCGC CGGTCCGGCC GTCACCGATG AGAAACTGCT CGGCGCGGGC
GTCGGCTTCG GCGTCCGCAA GGGCGACAAG GCCTTGAAGG ACGCGCTGAA CCAGGCGCTC
AAGGAACTGA AAGCGGACGG CACGATCGAC CGTTTCGCAG CGAAGTACTT CGACGTGAAG
GTGGTGTTGA AGTAA
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| Protein sequence | MKMNWRNIAA LALFAAASAT AGTAAAADIK EVHFGVEASY APFESKSPSG ELQGFDIDVG
NAVCAKLKAK CVWVENSFDG LIPALQARKF NAINSDMTIT DQRRQAVDFT DPIYTIPNQM
IAKKGSGLLP TPASLKGKHV GVLQGTIQET YAKARWAPAG VDVVPYQTQD QIYADLASGR
LDAAFQDAEA ASKGFLKKPQ GAGFEFAGPA VTDEKLLGAG VGFGVRKGDK ALKDALNQAL
KELKADGTID RFAAKYFDVK VVLK
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