| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1558 |
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| Symbol | argD |
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| ID | 6281074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1750448 |
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| End bp | 1751683 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621122 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001895195 |
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| Protein GI | 187923553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.751074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGACC TGACAGTGAC ACGCCAGACC TTCGACGAAG TCATGGTGCC GGTGTTTTCG
CCCGCCGCCT TCGTACCGGA TCGCGGTCTC GGCTCACGCG TCTGGGATAC GCAAGGCCGC
GACTATATCG ACTTCGCCGG CGGCATCGCC GTCACCGCTC TGGGCCATGC ACATCCTGAG
TTGCTGAACG TGCTGCACGA ACAGGGCGGC AAGTTGTGGC ATATCGGCAA TGGTTACACC
AACGAGCCGG TGTTGCGCCT CGCCAAACGC CTCGAAGACC TGACGTTCGC CGACCGCGCG
TTCTTCGCCA ACTCGGGCGC GGAAGCGAAC GAGGCCGCGT TGAAGCTGGC GCGCCGCGTC
GCGTTCGACC GCCACGGCGC GGATAAATAC GAAATCATCT CGTTCACGCA GTCGTTCCAT
GGCCGCACGT TCTTCACGGT CAGCGTAGGC GGCCAGCCGA AGTACTCGGA AGGCTTCGGC
CCGGTGCCTG CCGGCATCAC ACATCTGCCG TACAACGACA TCGAAGCCGT GAAGAAAGCC
ATCGGCGCGC AAACCTGCGC GGTGATCGTC GAGCCGATTC AGGGCGAAGG CGGCGTGATC
CCGGCTGATC CGGCGTTCCT GAAGGCGTTG CGCGAAGCCT GCGATCAGCA CGGCGCACTG
CTGATTTTTG ACGAGGTACA AACGGGTGTG GGCCGCAGCG GCTATTTCTA CGCGTACCAG
GAAACGGGCG TGACGCCGGA CATTCTCACC ACGGCGAAAG CGCTCGGCAA CGGTTTCCCG
ATCGGCGCGA TGCTGACCAC CAACGAACTG GCCGCGTATT TCAAGGTCGG CGTGCATGGC
ACAACATACG GCGGCAATCC GTTGGGCGCG GCGATCGCTG AGAAGGTGGT CGAGTTGGTC
AGCGATCCGA AGCTGCTCGA AGGCGTGCGC TCGCGCAGTG AAGCGCTGAA AGGCCACCTC
GCGAAGCTGA ACGAACGCTT CGGCCTGTTC ACGGAAGTGC GCGGCCGGGG TCTTCTGATC
GGCGCGGAAT TGAACGAGGC GTTCAAGGGC CGCGCGAAAG ATTTCGTCAC GGCAGCAGGC
CAGCACGGCG TGATCATGCT GATGGCCGGT CCCGACGTGC TGCGTTTCGT GCCGTCGCTG
ATCATGCCGC TCGACGACAT GAACGAAGGC TTCGAGCGAC TCGCCAAGGC CATCGAAAGC
ATTGTCGGCG CGAAGGCCGA AGCCGCGTCG AACTGA
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| Protein sequence | MNDLTVTRQT FDEVMVPVFS PAAFVPDRGL GSRVWDTQGR DYIDFAGGIA VTALGHAHPE
LLNVLHEQGG KLWHIGNGYT NEPVLRLAKR LEDLTFADRA FFANSGAEAN EAALKLARRV
AFDRHGADKY EIISFTQSFH GRTFFTVSVG GQPKYSEGFG PVPAGITHLP YNDIEAVKKA
IGAQTCAVIV EPIQGEGGVI PADPAFLKAL REACDQHGAL LIFDEVQTGV GRSGYFYAYQ
ETGVTPDILT TAKALGNGFP IGAMLTTNEL AAYFKVGVHG TTYGGNPLGA AIAEKVVELV
SDPKLLEGVR SRSEALKGHL AKLNERFGLF TEVRGRGLLI GAELNEAFKG RAKDFVTAAG
QHGVIMLMAG PDVLRFVPSL IMPLDDMNEG FERLAKAIES IVGAKAEAAS N
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