| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1557 |
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| Symbol | |
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| ID | 6281073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1749257 |
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| End bp | 1750306 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621121 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001895194 |
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| Protein GI | 187923552 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.150137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCA CGTCCAACCC GGCTCGCACC ACGCAGGTTG CCATCGTCGC CTTGCCGCCC
GTGTCGATGT CGGGCGTCGG GCCGATTGTC GACGCGCTCA ATCTCGCCAA CGAAATCGAC
GGCCGCGCGC TGTACCGCGT GCAGGTGTGC TCGTGGGACG GCCGCGCGGT GCCGCTCGCG
GGCGGCGCGC ACTGGCCCGC CGACGCCGCG TTCGGCGACG CGATTGCATG CGACTGGCTG
ATCATCGTCA GCGAGCGCTT TCAGCAATTC GCCGACTATC GCCTCTTTCT CGCCAGCCTC
TCACGCGTCG GGCAGCGCAC GCCGCTCGTC ACCGGCATTC ATCACGGCGT GTGGTGGCTT
GCCATGGCAG GGCAGTTGTC CGGCTATCGT GTGAGCGTCA ACTGGGAAAC CTATCAGCAG
TTCTCCGAGC AGTTCGAACG CTCCATCGTC ACGCAACAGA TCTTCGAAAT CGACCGCGAT
CGCGCAACCT GCGCGGGCGG CCAGGCGACT GTCGACTTCA TGCTGGCGAT GATCGGCCGC
GAGCACGGCC CCGAACTCGC GGACCGGATT GCCGACACGC TCGGCGTCGG CGTATTGCGC
GCGGGCGAGG AACGTCAGCG CATTCCGTTC GTGACCGCGC CGGGCGAGCG TCATCCGCGC
CTGAACGACG CGTTGCTGCT GATGGAAGCG AATATCGAAG ACCCGCTCAC CACCGACGAG
ATCGCCGGTC TGATCGGCGT GTCGCGGCGG CAATTGGAAC GCCTGTTTCG CCAGTATCTC
GGCTCGATGC CGTCCAAATA CTATCTGGGG CTGCGGCTTT CGAAAGCGCG CACGCAATTG
CAGCGCACCA GCAAGTCGGT GGTGCAGATC AGCCTGGCTT GCGGGTTTTC GTCGGCGGCG
CACTTTTCGA ATGCGTACCG TGAACGCTTT GGTGTCACAC CGCGCGAGGA TCGTCGTAAC
TGGATCGACA AGCAGACTGG CGCAAGCGGC GCCGCGGCCA GCGAGCCGCG GCCCGGCGCG
CTGATCGAGC GGCCGGATCA GGCGGATTGA
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| Protein sequence | MARTSNPART TQVAIVALPP VSMSGVGPIV DALNLANEID GRALYRVQVC SWDGRAVPLA
GGAHWPADAA FGDAIACDWL IIVSERFQQF ADYRLFLASL SRVGQRTPLV TGIHHGVWWL
AMAGQLSGYR VSVNWETYQQ FSEQFERSIV TQQIFEIDRD RATCAGGQAT VDFMLAMIGR
EHGPELADRI ADTLGVGVLR AGEERQRIPF VTAPGERHPR LNDALLLMEA NIEDPLTTDE
IAGLIGVSRR QLERLFRQYL GSMPSKYYLG LRLSKARTQL QRTSKSVVQI SLACGFSSAA
HFSNAYRERF GVTPREDRRN WIDKQTGASG AAASEPRPGA LIERPDQAD
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