| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1556 |
|---|
| Symbol | |
|---|
| ID | 6281072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1748440 |
|---|
| End bp | 1749231 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642621120 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001895193 |
|---|
| Protein GI | 187923551 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.648429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCCACA CGACTCAAAC CGAAGCTTGC AAGCTCGCCG TACAGGACAT CCACAAGCGC
TACGGCGACA ACGAAGTGCT CAAGGGCGTG TCGCTCAATG CGAACAAGGG CGACGTGATC
AGCATCATCG GCGCGAGCGG GTCGGGCAAG AGCACCTTCC TGCGCTGCAT CAATTTCCTC
GAGCGGCCGA ACGCCGGGCA GATCGTCGTC GACGGCGAGA TGGTGAAGAC GAAAACCGAT
CGCGCCGGCA ATCTCGAAGT CGCCGATCAC AAGCAGTTGC AGCGAATCCG CACGAAGCTC
GCCATGGTGT TCCAGCACTT CAACTTGTGG GCGCACATGA ATGTGCTCGA GAACATCGTC
GAGGCGCCGA TTCACGTGCT GGGTCTGAAG CGCAAGGAAG CCGAAGACCG CGCGCGCGAA
TATCTGGAGA AGGTCGGTCT CGCGCCGCGC CTCGAAAAGC AGTATCCGTC GCATCTGTCG
GGCGGGCAGC AGCAGCGTGT GGCGATTGCC CGCGCGCTGG CCATGAACCC CGACGTGATG
CTGTTCGACG AGCCGACTTC CGCGCTCGAT CCCGAACTGG TCGGTGAAGT GCTGAAGGTC
ATGCAGAAGC TCGCCGAAGA AGGCCGCACG ATGATCGTCG TTACGCACGA AATGGGTTTC
GCGCGCAACG TGTCGAACCA TGTGATGTTC CTGCATCAAG GCCGCACCGA AGAAGAAGGC
CTGCCCGCTG AAGTGCTCAG CGCGCCGCGT AGCGAACGGC TCAAGCAGTT CCTGTCCGGC
AGCCTGAAGT AA
|
|---|
| Protein sequence | MLHTTQTEAC KLAVQDIHKR YGDNEVLKGV SLNANKGDVI SIIGASGSGK STFLRCINFL
ERPNAGQIVV DGEMVKTKTD RAGNLEVADH KQLQRIRTKL AMVFQHFNLW AHMNVLENIV
EAPIHVLGLK RKEAEDRARE YLEKVGLAPR LEKQYPSHLS GGQQQRVAIA RALAMNPDVM
LFDEPTSALD PELVGEVLKV MQKLAEEGRT MIVVTHEMGF ARNVSNHVMF LHQGRTEEEG
LPAEVLSAPR SERLKQFLSG SLK
|
|---|
| |