| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1554 |
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| Symbol | |
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| ID | 6282333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1746951 |
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| End bp | 1747640 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621118 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001895191 |
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| Protein GI | 187923549 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.699614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCCTAT ACGGCTTTGG TCCGGTGTTG CTGGCCGGCA CGATCCAGAC GATCGAGCTG
TCCGTCCTGT CGCTGGCGGC CGCCGTGCTG CTCGGTCTCG CGGGCGCAGC GGCGAAACTC
TCGTTCAACC GCCCGCTGCG GGCAATCGCG ACCGGCTATA CGACGCTGAT CCGCTCAGTG
CCCGACCTCG TGCTGATGCT GCTGCTGTTC TACAGCATCC AGATCGCGGT CAACAATCTC
ACCGACGCGC TGAACCTCCC GCAGTTCGAT ATCGACCCGT TCGTGGCCGG CGTGCTGACG
CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACCTTTC GCGGCGCGTT TCTGGCGGTG
CCGCGCGGCC AGCTCGAAGC GGGCAGCGCG TACGGCATGA GCGGCGCGCG CGTGTTCACG
CGCATCCTGT TCCCGCAGAT GATGCGTTTC GCGCTGCCGG GCATCGGCAA CAACTGGCAG
GTGCTGGTGA AAGCGACGGC GCTGGTGTCG ATCATCGGTC TCGCCGACGT GGTCAAAGCC
GCGCAGGACG CCGGCAAAAG CACCTTCAAC ATGTTCTTCT TCATCCTGGT CGCCGCGCTG
ATCTATCTGG CGATCACCAC CGCGTCGAAT CTTGTGCTGA TCTGGCTGGA AAAGCGCTAT
TCGATCGGCG TGCGGCACGC GGAGCTCTGA
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| Protein sequence | MFLYGFGPVL LAGTIQTIEL SVLSLAAAVL LGLAGAAAKL SFNRPLRAIA TGYTTLIRSV
PDLVLMLLLF YSIQIAVNNL TDALNLPQFD IDPFVAGVLT LGFIYGAYFT ETFRGAFLAV
PRGQLEAGSA YGMSGARVFT RILFPQMMRF ALPGIGNNWQ VLVKATALVS IIGLADVVKA
AQDAGKSTFN MFFFILVAAL IYLAITTASN LVLIWLEKRY SIGVRHAEL
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