Gene Bphyt_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1544 
Symbol 
ID6283789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1735627 
End bp1736847 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content63% 
IMG OID642621108 
Productalpha/beta hydrolase fold 
Protein accessionYP_001895181 
Protein GI187923539 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGTA GAATCGTGCG CTTCCGGCCG GAGGTGTTGG GCGCTGGTCT CACCGTGCGT 
TTGCCGCGCA TGCCTCTCCG CGTTTTCCTT TTAGAAAAAA CCTCAATGAG TTTTCGCCGC
CTGTCTTTGC TCGCCACGTT GAGCGCTTGC GCGCTAGCCG CGACCTCCAT GCCCGCTGTT
TTTGCGGCTT CCGCCGCCAC GCCTGCGAGC GTCGAAGCGC AGAGTCCGGC CGACCAGGCC
GCTTCCGCCA CCACGAGCGT CACGGGCGAT ACCGGCCCGG CGTACGGCGC CGAGTTGCAG
GGCTTCAACT ACCCGGCGCC AGTCAGCCAG TACGACTTCA CTTCGCAAGG GGTGGCGCTG
CATATGGCGT ACATGGATAT CAAACCGGTC AAGGCGAATG GCCGCACGGC GGTGCTGCTG
CACGGCAAGA ACTTCTGCGC GGCGACGTGG GACGCGACCA TTCATCGGCT GAGCGATGCC
GGCTATCGCG TGATCGCGCC GGACCAGATC GGCTTTTGCA AGTCGAGCAA GCCTGAGCAC
TATCAGTACA GTTTTCAACA GCTCGCGCGC AATACGCATG CGTTGCTGCA ATCGCTCGGC
GTGACCGACG CGACCGTGAT CGGGCATTCC ACCGGCGGCA TGCTGGCGAT CCGCTACGCG
CTGATGTATC CGCGCGAGAC GCAGCAACTG GTGCTGGTCA ACCCGATCGG TCTGGAGGAC
TGGAAGGCGA AGGGTGTGCC CTCGCTGTCC GTGGACCAGT GGTATGCGCG CGAGTTGAAG
ACGACCGCCG AAAGCATTCG CCGCTACGAG CAGTCCACCT ACTACGCGGG ACAATGGCGC
GCGAGCTACG AACCGTGGGT GCAGATGCTG GCGGGCATGT ATCGCGGTCC GGGCAAACAG
ATCGTCGCGT GGAATTCCGC GCTGCTGTAC GACATGATTT ACACGCAACC GGTGGTGTAC
GAACTGGGGC AATTGAGCAT GCCGACGCTG CTGCTGATCG GCCAGAAAGA CACCACGGCG
ATCGCCAAGG ACGCTGCGCC GGCCGAAGTG CGCGCAAAAC TCGGCCATTA TCCGGAGCTC
GGCAAGGCCG CCGCAAAGGC GATCCCGCAC GCGACGCTCG TCGAATTCGC GGAGTTGGGG
CACGCACCGC AGATGCAGGA TCCGCAGGCG TTTCATAAAG CGTTGCTGGC CGGTCTCGCG
GCGGTGCCGG CCAACCATTG A
 
Protein sequence
MHRRIVRFRP EVLGAGLTVR LPRMPLRVFL LEKTSMSFRR LSLLATLSAC ALAATSMPAV 
FAASAATPAS VEAQSPADQA ASATTSVTGD TGPAYGAELQ GFNYPAPVSQ YDFTSQGVAL
HMAYMDIKPV KANGRTAVLL HGKNFCAATW DATIHRLSDA GYRVIAPDQI GFCKSSKPEH
YQYSFQQLAR NTHALLQSLG VTDATVIGHS TGGMLAIRYA LMYPRETQQL VLVNPIGLED
WKAKGVPSLS VDQWYARELK TTAESIRRYE QSTYYAGQWR ASYEPWVQML AGMYRGPGKQ
IVAWNSALLY DMIYTQPVVY ELGQLSMPTL LLIGQKDTTA IAKDAAPAEV RAKLGHYPEL
GKAAAKAIPH ATLVEFAELG HAPQMQDPQA FHKALLAGLA AVPANH