Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1530 |
Symbol | |
ID | 6283574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1717207 |
End bp | 1718730 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642621094 |
Product | histidine ammonia-lyase |
Protein accession | YP_001895167 |
Protein GI | 187923525 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.851036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACTC TGAAGCCCGG CTACCTGACC CTCCCGCAAC TGCGCCAGAT CGCACGCGAA CACGTCGCGT TGCAACTCGA TCCCGCCAGC CACGCCGCGA TCGACGCCTG CGCGCAAGCC GTGGCCGATA TCGCCGCGAA GGGCGAACCG GCCTACGGCA TCAACACGGG CTTTGGGCGC CTCGCCAGCA CGCATATCCC GCACGACCAG CTCGAACTGC TGCAACGCAA TCTGGTGCTC TCGCATGCAG TCGGCGTGGG TGAGCCGATG TCGCGTCCGG TGGTGCGCCT GTTGATCGCG CTGAAGCTAT CGAGCCTCGG CCGTGGTCAC TCTGGCATCC GCCGCGAAGT GATGGAAGCG CTGATCACGC TGTACAACGC CGACGTGCTG CCGGTCATTC CGGTGAAGGG TTCGGTCGGC GCATCCGGCG ACCTCGCGCC GCTCGCGCAT ATGTCGGCAA CGCTGCTCGG CGTCGGCGAA GTGTTCGCCA AGGGCGAGCG CATGCCGGCC ACCGAAGGCC TCGCGCTCGT CGGCCTCAAG CCGCTCACGC TGCAAGCCAA GGAAGGTCTG GCGCTGCTGA ACGGCACGCA GGCTTCGACC GCGCTCGCGC TCTACAACAT GTTCGCCATC GAAGACCTGT ACCGCACCGC GTTGGTGTCG GGCGCGTTGT CGGTGGACGC GGCCATGGGT TCGGTCAAGC CGTTCGACGC ACGCATTCAC GAACTGCGTG GTCATCAAGG CCAGATCGAT GCGGCCGGTG CATACCGCTC ACTGCTGCAA GGCTCGGGCA TCAACGTCTC GCACGCCGAT TGCGACAAGG TGCAGGATCC GTACAGCCTG CGCTGCCAGC CGCAAGTGAT GGGCGCGTGT CTGGATCAGA TGCGCCACGC CGCCAACGTG CTGCTGCTCG AAGCGAACGC GGTCTCCGAC AATCCGCTGA TTTTCCCGGA CACCGGCGAA GTGCTGTCGG GCGGTAATTT CCACGCGGAG CCGGTGGCCT TCGCCGCCGA CAACCTCGCG CTCGCCGCCG CCGAAATCGG CGCACTGGCC GAACGCCGCA TCGCGCTGCT GATCGACGCG ACGCTGTCGG GTCTGCCGCC GTTCCTCGTG CGCGACGGTG GCGTGAATTC GGGCTTCATG ATCGCTCACG TCACGGCCGC CGCGCTCGCT TCGGAGAACA AGACGCTCGC GCATCCGGCT TCGGTCGATT CGCTGCCCAC GTCGGCGAAC CAGGAAGACC ACGTGTCGAT GGCGACCTTC GCCGCGCGCA AGCTCGGCGA CATTGCTGAA AACACCGCGA ACATTCTGTC GATCGAACTG CTCGCCGCCG CGCAAGGCGT CGATCTGCGC GCGCCGCACA AGACCAGCCC GAGCCTGCAA AAAGTGATGG ACGCCGTGCG CAAGGACGTC GCGCATTACG AACTCGATCA CTACTTCGCA CCGGATATCG CGGCGGTCAC GCGTCTCGTG CAGGACGGCA CGATCGCGAA GCTGAGCCCG CTCTCCTTCG CGTCCGAACA GTAA
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Protein sequence | MMTLKPGYLT LPQLRQIARE HVALQLDPAS HAAIDACAQA VADIAAKGEP AYGINTGFGR LASTHIPHDQ LELLQRNLVL SHAVGVGEPM SRPVVRLLIA LKLSSLGRGH SGIRREVMEA LITLYNADVL PVIPVKGSVG ASGDLAPLAH MSATLLGVGE VFAKGERMPA TEGLALVGLK PLTLQAKEGL ALLNGTQAST ALALYNMFAI EDLYRTALVS GALSVDAAMG SVKPFDARIH ELRGHQGQID AAGAYRSLLQ GSGINVSHAD CDKVQDPYSL RCQPQVMGAC LDQMRHAANV LLLEANAVSD NPLIFPDTGE VLSGGNFHAE PVAFAADNLA LAAAEIGALA ERRIALLIDA TLSGLPPFLV RDGGVNSGFM IAHVTAAALA SENKTLAHPA SVDSLPTSAN QEDHVSMATF AARKLGDIAE NTANILSIEL LAAAQGVDLR APHKTSPSLQ KVMDAVRKDV AHYELDHYFA PDIAAVTRLV QDGTIAKLSP LSFASEQ
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