| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1528 |
|---|
| Symbol | |
|---|
| ID | 6280765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1714897 |
|---|
| End bp | 1715856 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621092 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001895165 |
|---|
| Protein GI | 187923523 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.417998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATGTCA TCGTGTTTCT CATCAAGGAG AACGTCTTGA AGATTTTCAT CACAGGGGCA
AGCGGTTTCA TCGGCGGCTC GATCGCAGCA CATCTGGCGC GCGCCGGCCA CACCGTGCGC
GGTTTGATCC GCAACCCCGA ACATAGCGCC GAGCTGCAAC GCCTCGGTAT CGAACCCGTG
ATCGGCACGC TCGACGACCG CGCGTTGCTG ATCGCCGAAG CGCAAGCCGC CGACGCCGTC
ATCAACGCCG CGAGCAGCGA TCATGAAGGC GCGGTGAAGG CGCTGATCGA CGGACTCGCC
GGCTCCGGCA AAACGTTTCT GCATACGAGC GGTTCGAGCA TCGTCGGCGA TGCGTCGGGC
GGCGAAGCAG GTCAGGCGCG CATCTATCAC GAGGACGCGC TGCCCGAGCC GACTCCCGAC
AAAGTGGCGC GCGTCGCGAT CGACCTGCTA GTGCTCAATT CGGCCAAGCT GAATATCCGC
TCGGCCGTGT TGTGCAACAC GCTGATCTAC GGCCACGGCG CGGTGCCGGG CAGCGCGAGC
GTGCAACTGC CGCGCCTCGT GCGTCAGGCG CTAAAGAGCG GCGTGGTGCG TCATGTGGGC
AGTGGCGGCA ACATCTGGTC GAACGTGTAT ATCGACGATG TCGCCGAACT GTATCGCCTC
GCGTTGGACA AGACGCCGGC GGGCACCTTC TACTTCGTCG AAAGCGGCGA GGCGTCGTTT
AGCGACATGA GCGCCGCGAT TGCGCGCGCG ATGAAGCTCG GCGAGCCGCA AGACTGGCCG
CTCGAAGACG CGCAAAAGGA ATGGGGCTAC GAAATGGCCT CGTACGGCCT CGGCTCGAAT
AGCCGCGTGC GCGGTGAACG CGCCCGCAAG CTGCTTGGAT GGCAACCGAA GCGCACGTCG
GTGATCGACT GGATCGAGCA CGACATGATG TCTCCGGAGC ATACGTCGTC CGCGGCGTAA
|
|---|
| Protein sequence | MHVIVFLIKE NVLKIFITGA SGFIGGSIAA HLARAGHTVR GLIRNPEHSA ELQRLGIEPV
IGTLDDRALL IAEAQAADAV INAASSDHEG AVKALIDGLA GSGKTFLHTS GSSIVGDASG
GEAGQARIYH EDALPEPTPD KVARVAIDLL VLNSAKLNIR SAVLCNTLIY GHGAVPGSAS
VQLPRLVRQA LKSGVVRHVG SGGNIWSNVY IDDVAELYRL ALDKTPAGTF YFVESGEASF
SDMSAAIARA MKLGEPQDWP LEDAQKEWGY EMASYGLGSN SRVRGERARK LLGWQPKRTS
VIDWIEHDMM SPEHTSSAA
|
|---|
| |