Gene Bphyt_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1515 
Symbol 
ID6283794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1700503 
End bp1701894 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content62% 
IMG OID642621080 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001895153 
Protein GI187923511 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT CAGTAAAGCG CGCGTTTGAA GGGGTAAAAC TGTTTCCGTT CTGGCTGGAC 
AATCCGCGCG CGCCGGTTGT CGAACGGGAA TTGATCGGTC CGACCACCGC CGATCTGGTC
GTGGTGGGCG GCGGCTTCAC CGGTCTGTGG GCCGCGATTC AGGCGAAAGA AGCCGATCCG
TCGCTCGACG TCGTGCTGGT CGAAGCGGGC AAGGTGGCGT ACGGCGCCTC GGGCCGTCCA
GGCGGCATCA TCTCGACTTC GGTGATGCAC GGTCTGCCGA ACGCGACGCG CGTTTTTCCG
CAAGACCTCG ACGTGCTCGA AAAGCTCGGG CAGGAGAATC TCGACGGCTT CAAGGAATCG
TTGACGCGCT ACGGCATCGA GGCGGACGTC GAATGGAACG GAGAGATGAC AGTCGCGGTC
GATCCGGGCC ATCTCGGTCA TCTGAAGGGC GACTACGAGC TGCATGTCGC CCACGGACAC
GACGTGGTCT TGCTCGACAG CAAGGGCGCA CGCGAGCAAC TCGATTCACC TCTTTTTGCC
GGGGCAATGT GGTCGCGTAA TCGCAGCGGC ACGATTCATC CGGCGAAACT CGCGTGGGGT
TTGAAGGCCG CCGCGCTGAA ACTCGGCGTG CGTCTGCATG AACATTCACC GATCACGCGT
CTCGAAGATT GCGGCGCGAA GATGATCGTG CACACGCAGG CGGGCCGCAT CGAAACGCCG
CGCGTGCTGC TAGGCACGGG CACCGCTGAC GTCGGCGTGA CCGATATCAA GCGCCGCGTG
ATGCAGGTGC GCGATCACAT CATCGCGACG GCGCCGTTGA GCGACGAGCA GATGGCGCGG
ATCGGCTGGA AGAATCGCCA GGGCATTTAC GACACTCGCA CGCAGCTCAA TTATTTCCGG
CTGACCAAGG ACAACCGGAT CATCTTCGGC GGACGGGTGA GCTATCACTT CGGCGGCAAT
CCGAATCCCG CGGAAGATCG CGACGAGCGT ACCTATTACA AGCTTGCCGA AGCGTTCTAT
CGCACCTTCC CGCAACTCGA CGACGTGCGT TTCACGCATG CATGGGGCGG CCCGATCGAT
TACTGCTCGC GCGGCGCAGT GTTCGCGCGC CGCTATCACG GTGGCAAGAG CGTGTTCGTC
GCCGGCTATA CGGGCTTCGG CGTGGCGGGC AGCCGCTTCG GCGCGAAGAT GGGCCTCGAC
ATGCTGTGGC ATCGCGATAC GGTGATCACG TCGCTCGATA TTTCGCGCAA GGGGCCGTCG
TATATTCCGC CGGAACCGGT GCGCTGGATC GCCGCGAAGA TCACCTTCAA CGCGTTCGAC
GGCGCGGATG ATCGCGGCGG CTGGCGTCGT CTGTGGATCA ATTCGATCAA GGCGCTGGGT
TTTCCGATGT AA
 
Protein sequence
MSESVKRAFE GVKLFPFWLD NPRAPVVERE LIGPTTADLV VVGGGFTGLW AAIQAKEADP 
SLDVVLVEAG KVAYGASGRP GGIISTSVMH GLPNATRVFP QDLDVLEKLG QENLDGFKES
LTRYGIEADV EWNGEMTVAV DPGHLGHLKG DYELHVAHGH DVVLLDSKGA REQLDSPLFA
GAMWSRNRSG TIHPAKLAWG LKAAALKLGV RLHEHSPITR LEDCGAKMIV HTQAGRIETP
RVLLGTGTAD VGVTDIKRRV MQVRDHIIAT APLSDEQMAR IGWKNRQGIY DTRTQLNYFR
LTKDNRIIFG GRVSYHFGGN PNPAEDRDER TYYKLAEAFY RTFPQLDDVR FTHAWGGPID
YCSRGAVFAR RYHGGKSVFV AGYTGFGVAG SRFGAKMGLD MLWHRDTVIT SLDISRKGPS
YIPPEPVRWI AAKITFNAFD GADDRGGWRR LWINSIKALG FPM