| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1501 |
|---|
| Symbol | |
|---|
| ID | 6283045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1684887 |
|---|
| End bp | 1686704 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642621066 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_001895139 |
|---|
| Protein GI | 187923497 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCA TTGTCGGCGC GGTAGCGCAA CGTAACATCG TCCCGGTTCT GATCGAAGGA
CTGCGGCGTC TCGAGTATCG CGGCTACGAC TCGTGCGGCG TCGCCGTGCT CGCCGCCGCC
GGTCCGCGCC GCGCGCGCAG CACGGCGCGC GTCGCCGATC TCGACGCGCA GACGCGCGAG
ACGCATCTGG AAGGCGGCAC GGGCGTCGCG CACACGCGTT GGGCGACGCA TGGCGCGCCG
GTCACGGACA ACGCGCATCC GATCTTTTCG AAGGACGAGT TGGCGCTGGT GCATAACGGC
ATCATCGAAA ACTACGAGCC GTTGCGCGAG ATGCTGCGCG CGAAGGGCTA TGTGTTCGTT
TCGCAAACCG ACACGGAAGT GGTCGCGCAC CTGGTGCACA GCCTGTATCG CGGCGATCTG
TTCGAGGCGG TTCGCGAGGC GGTGAAGCAA CTGGACGGCG CATACGCGAT CGCGGTCGAA
CATAAGGCTC ATCCGCATCT CGTGGTGGGC GCGCGGCAGG GTTCGCCGCT CGTCGTCGGG
ATCGGCGAAG GCGAGAATTT CCTCGCGTCC GATGCGCTCG CTTTGGCCGG TGAGACCGAA
CGCTTCATCT TTCTGGAAGA GGGCGACGTG TGCGAGTTGA CGCTCGAGCG CGTGCGCGTG
GTGAGCCGCG ACGGCATCGA CGTAGAGCGC GAAGTGCGCA CGGTCGCCGC GTATGGCGGC
GGCGTGGAGC TCGGTCCGTA CCGGCATTTC ATGCAGAAGG AAATCTTCGA GCAACCGCGC
GCGATCGCCG ATACGGTGCC GCAAGGCGAA TCGCTCGATG CGTCGTTGTT CGGTGAAGAG
GCTGCGGCCG TGTTTGCCGA TATCGACAGT CTGTTGATTC TCGCGTGCGG CACCAGCTAT
TACTCGGGAC TGACGGCCAA GTACTGGCTC GAATCGATTG CGAAGATTCC GACGCAGGTC
GAAATCGCCA GCGAGTACCG TTATCGCGAT TCGGTGCCGA ATCCGAAAGC GCTGGTGGTC
GTGATTTCCC AATCGGGCGA AACGGCCGAC ACGCTCGCTG CGTTGAAGCA TGCGCAGTCG
CTCGGACACA AGCACACGCT GTCGGTCTGC AACGTGGCGA CGAGCGCGAT GGTGCGCTTG
ACGTCACTCT CGTTTCACAC GCACGCGGGA CGCGAGATTG GCGTGGCGTC GACCAAGGCG
TTCACCACGC AGCTGGTCGG ACTGTTCGTG CTTGCCGCGA CGCTCGGCAA AATTCGCGGC
ACGGTGAGCC CAGAACAGGA GGCCGACTAT GTGCGCCAGT TGCGCCATCT GCCGGCCGCG
TTGAACGCGG TGCTGGCGCT GGAGCCGCAG ATCATCGCGT GGTCGGAGAA GTTTTCGGGC
AAGGAAAGCG CGCTGTTTCT CGGACGCGGC TCGCACTATC CGATCGCACT CGAAGGCGCG
CTCAAGCTCA AGGAGATTTC CTATATTCAT GCGGAGGCGT ATCCCGCCGG TGAATTGAAG
CATGGCCCGC TGGCGCTCGT CACCGACGCG ATGCCTGTCG TCACAATCGC GCCGAACGAC
GCGTTGCTCG AGAAGCTGAA GTCGAATCTT CAGGAAGTGA AGGCGCGTGG CGGCGAGCTG
TATGTGTTTG CCGATACGGA TACGCGGATC GGGAGTGAGC CAGGCATTCA TGTGATCAGA
ATGCCTGAGC ACTATGGGCC GTTGTCGCCG CTTCTGCATG TGGTGCCGTT GCAGTTGCTG
GCTTATCACA CGGCGTGCGC GCGCGGGACC GATGTGGATA AGCCGAGAAA TCTGGCGAAG
TCCGTGACGG TGGAGTAA
|
|---|
| Protein sequence | MCGIVGAVAQ RNIVPVLIEG LRRLEYRGYD SCGVAVLAAA GPRRARSTAR VADLDAQTRE
THLEGGTGVA HTRWATHGAP VTDNAHPIFS KDELALVHNG IIENYEPLRE MLRAKGYVFV
SQTDTEVVAH LVHSLYRGDL FEAVREAVKQ LDGAYAIAVE HKAHPHLVVG ARQGSPLVVG
IGEGENFLAS DALALAGETE RFIFLEEGDV CELTLERVRV VSRDGIDVER EVRTVAAYGG
GVELGPYRHF MQKEIFEQPR AIADTVPQGE SLDASLFGEE AAAVFADIDS LLILACGTSY
YSGLTAKYWL ESIAKIPTQV EIASEYRYRD SVPNPKALVV VISQSGETAD TLAALKHAQS
LGHKHTLSVC NVATSAMVRL TSLSFHTHAG REIGVASTKA FTTQLVGLFV LAATLGKIRG
TVSPEQEADY VRQLRHLPAA LNAVLALEPQ IIAWSEKFSG KESALFLGRG SHYPIALEGA
LKLKEISYIH AEAYPAGELK HGPLALVTDA MPVVTIAPND ALLEKLKSNL QEVKARGGEL
YVFADTDTRI GSEPGIHVIR MPEHYGPLSP LLHVVPLQLL AYHTACARGT DVDKPRNLAK
SVTVE
|
|---|
| |