| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1497 |
|---|
| Symbol | |
|---|
| ID | 6282208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1680107 |
|---|
| End bp | 1681480 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642621062 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_001895135 |
|---|
| Protein GI | 187923493 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4267] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.606313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTA TCGGCTTCGA ATTACGCAAG ATCATGCGCC GCGACACGCT GACCGGCGTG
GCGCGCGCCT ATGCTTACGC GGGCCTGATC AGTTCCGGTC CGCTGATCCT GTCGATCTTC
GGCATCCTGA TCATCGGCCT GATCAGTCTC ACTTCGGTGA TTCCGACGTT CGCGATCGTG
CAGTTCCAGG TGTCGGTCAC GTATCTGATC GCGCTCAGTC TGATTCTGAC CGGGCCGCTG
CAACTGTCGT TCACGCGCTT CATCTCCGAC CGGCTGTTCG AAAAGCGCGA CGACCTCGTG
CTGTCGAACT ACAACGGCGT GGTGCTGGTG TCGTCGATGT TGGCCAGCGT GGTCGCGGTG
GTCGCGATGC TGGTGGGCTT TCGCGAGGAG CCGCTGATCT ACCGCTTGCT GATGATTACG
GGCTTCGTGG TGGTCAGCAA CATCTGGATC GCCGTGATCT TCCTGTCGAG CGTCAAGCAG
TACCGGCAGA TCCTGATGGT GTTCGCCGTC GGCTATGCGT GCGTGGTGTG TCTCGCACTC
GCGTTGAACG GCTATGGACT GGTCGGTCTG CTTGGCGGCT TCGTGGCCGG GCACATCGTG
CTGCTCGCCG GTCTGTCGGG TCTGATTTAC CGTAACTACC GCAGCGAGCG TTTCGTGTCG
TTCGAAGTGT TCGAGCGGCG CTTCGCCTAT CCGAGCCTCG CGCTGGTCGG CCTGCTGTTC
AATATCGGCG TGTGGCTCGA CAAGTTCATG TTCTGGTATG CGCCGGGTAC GGGCACGCGC
GTGATCGGGC CGCTGCATGC ATCGGTGATT TACGACATTC CGATTTTTAT CGCCTACGTG
TGCGTGATGC CCGGCATGGC GACGTTCCTC GTGCGCATCG AGGCGGATTT CGTCGAATAC
TACGACGCCT TTTACGACGC GGTGCGCAGC GGCGCGACGC TGCGCCATAT CAACGAAATG
CGCGACATGA TGGTGGGCAG CGTGCGAGCC GGGCTGTATG AAATCATCAA GGTGCAGGCG
GTCGTGCTGC TGCTGATCGT CGCCTTCGGC GAGCGCGTGC TGGGCTCGCT CGGCATTTCG
CCGTTGTATA TGCCGCTGCT TGTGGTCGAC GTGGTGTCGG CGAGTCTGCA GGTGTTGCTG
CTCGGTCTGC TCAACGTGTT CTTCTATCTC GACGGGCGGC GCATGGTGCT GCGGCTCACC
GGCGCATTCG TCGTGCTGAA TGGACTCTTC ACCGGCATCA CGCTCAGGCT CGGGCCGGAT
TTCTATGGCT ATGGATTTGC GCTGGCGTTG CTGGTCGTGG TGGTGGCAGC CGTGAAGGTG
CTCGATCGCA AATTCATGTC TTTGGAATAC GAAACGTATA TGTTGCGGGG TTGA
|
|---|
| Protein sequence | MAGIGFELRK IMRRDTLTGV ARAYAYAGLI SSGPLILSIF GILIIGLISL TSVIPTFAIV
QFQVSVTYLI ALSLILTGPL QLSFTRFISD RLFEKRDDLV LSNYNGVVLV SSMLASVVAV
VAMLVGFREE PLIYRLLMIT GFVVVSNIWI AVIFLSSVKQ YRQILMVFAV GYACVVCLAL
ALNGYGLVGL LGGFVAGHIV LLAGLSGLIY RNYRSERFVS FEVFERRFAY PSLALVGLLF
NIGVWLDKFM FWYAPGTGTR VIGPLHASVI YDIPIFIAYV CVMPGMATFL VRIEADFVEY
YDAFYDAVRS GATLRHINEM RDMMVGSVRA GLYEIIKVQA VVLLLIVAFG ERVLGSLGIS
PLYMPLLVVD VVSASLQVLL LGLLNVFFYL DGRRMVLRLT GAFVVLNGLF TGITLRLGPD
FYGYGFALAL LVVVVAAVKV LDRKFMSLEY ETYMLRG
|
|---|
| |