| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1495 |
|---|
| Symbol | |
|---|
| ID | 6282206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1677448 |
|---|
| End bp | 1678458 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642621060 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_001895133 |
|---|
| Protein GI | 187923491 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAGA CCCTTTCTCT CATCGTCGGC GCGCTCGCGG CCGTGGTGGC CGTGATCGTG
CAATATCTGG CGATCGCGAG CCTGCTGCAA CCGCCCGGCG CGCTCGATCC GCTGCTGCGC
TTTTTCGCGT GGCAGGCGTT GGCGGGACTC GCCGAGGCAA TCGCGTTCCG CTCATGGCTG
CCGCTGAATT ACCGCGAGCC GCGCGCGGTT TCGCTGCTGT TCCTGTGGCT CGCCTGTACC
TTCGTGCCGC TGTTCGGCGG CCTCGTCGTG CTGATCAGCT GCATCTGGGC GGCGCTCTTT
CCGGGAGCCA AGGAAAGCGA TCAACTCGCC GATGTGCCGC GCCCGGAATT CGTCACCTAC
CTGGTGTCGC GCGTGTCGCA CGGCGGCGGC GCGCGTTTGC AGGCGCGCCT AGCCAACACT
CAGGTGTCGC CCACTGACCG GCTGTCCGCG CTGGTGGCGA TCCAGAGCAT GCCTACCCGC
ACCACGGGCA CGTTGCTGCG CGAGTTGCTT GCCGATCCGC TCGAAGACAT TCGCCTGATC
GCTTACGGCA CGCTGGATCA CGCCGAAAAC GAGATCATGC AGAAGATCTT CCGCACCAGC
AAAGCGCTGG AAACGACGGA CAACGACGTT GAGCGTCATG CGCTGAACCG CCTGCTCGCC
GAGCTGTACT TCGAACTCGT GTACCAGAAC CTGGTGCAGG GCGCGGTATA CCGCCATACG
CTGCAACAGG CCGACCGCTA CGCCCAGGCG GCGCTCGAAA CCGACCCGGG CGACGCCGCG
CTGTGGCTGA TTCGCGGCCG TCTCGCGCTG GCGAACGGCT TGCCCAATGC CGCGCATGAA
TACATCGGCC AGGCGCTCGC ACTCGGTTTC CCGCGCGAAC GGCTGGTGCC GTGGCTGGCG
GAAGCCGACT TTCTGCGCGG CGACTACGCT CGCGTCAAGC AGCTTCTCGC ATCGCTGGGC
AATGCCGCCG CGTTGCCCAC ACTCAAACCG GTTGTGAAGT ACTGGTCATG A
|
|---|
| Protein sequence | MSKTLSLIVG ALAAVVAVIV QYLAIASLLQ PPGALDPLLR FFAWQALAGL AEAIAFRSWL
PLNYREPRAV SLLFLWLACT FVPLFGGLVV LISCIWAALF PGAKESDQLA DVPRPEFVTY
LVSRVSHGGG ARLQARLANT QVSPTDRLSA LVAIQSMPTR TTGTLLRELL ADPLEDIRLI
AYGTLDHAEN EIMQKIFRTS KALETTDNDV ERHALNRLLA ELYFELVYQN LVQGAVYRHT
LQQADRYAQA ALETDPGDAA LWLIRGRLAL ANGLPNAAHE YIGQALALGF PRERLVPWLA
EADFLRGDYA RVKQLLASLG NAAALPTLKP VVKYWS
|
|---|
| |