| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1494 |
|---|
| Symbol | |
|---|
| ID | 6282205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1676043 |
|---|
| End bp | 1677455 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642621059 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_001895132 |
|---|
| Protein GI | 187923490 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATACCG CAGCCGTGGA AAACAACCCA GGCGCCTCGA AGCCGCGCCA TGCGCATCCG
TTCGGCAATC TCGGACGCGT GCGCCGCCTG CTGGCGCCCG CGGTGGCGCG GCCGTTCGCG
ATCGTGGAGA CCGTCGTGCT CGTGCTGGTC GTACTGGCCG TGGCGCACTG GCTCCATCCT
GAAGACCCGT TGCTGCTGCA CAATGGTTTT CCGTGGCTCT GGCTGGCGTC GCTGCTGGTG
GCCTTGCGCT ACGGCAGCCT GCTCGGTCTG CTGAGCGGAG CGTTGATGCT CGGCGCGTGG
GCGCTCTTTT ATCCGCACGG CGGCCCGTTC CCCACGCTGT ATTTCGCGGG CGGTCTGATC
CAGACGATTC TCGCCGGGCA CTTCGGCGAT ACGTGGGGCA GCCGCGCCGA GCGCGCGTCG
TCGTTGAACG ATTACCTGAA CGACCGTCTC GTCGCGTTGA CCAACAGTCA CTATCTGATG
CGGCTCTCGC ACGAGCGGCT CGAAAAGGAT TTGTTGTCGC GTCCGACTAC GTTGCGCGAT
TCGATTACCG AGCTGCGCCG TCTGTCGGTC GCCACCGATA CCGCGCTCGC CGCGCCGGCA
ACGGGCAAGG AAAACGATCC ACTTGGCGGC GCGAGCGGTC TGCTCGAATT TGTCGCGCAA
GCCTGCCAGA TCGAAGTCGC GGCGCTGTAT CCGGTGCATC ACGGTAAGCT CGGCACGCAG
GCCATCGCGC AGATCGGCGA CCCGTTCGAA TTCGCCGCGC ACGACGAACT CGTCACGCAT
GCATTGAACA CGCTGAGCGT CGCGCATCTG AAGAACGAAG ACACCGTCGT GCCGGTCAGC
CAATACCTGG TGTGCGCGCC GCTCGTATCG GCGGACGGCG AACTGCGCGC GCTGCTGGTC
GTCAAGCGCA TGCCGTTCCT GTCGCTCAAC TTCGACAACC TGCAATTGCT GCTGGTGCTG
CTCGGCTATT ACGCGGACGG CGTCGAGCAT TCCGCATTCG TACAGCGCAT TCTCGACCGC
GTGCCGAACT GCCCGTATGA ATTCGCACTC GATCTGAGCC GCCTCACGCG TCTCCAGCAG
AAGGCCGGTG TGGCGTCGTC GCTCGTCGCG CTGGCGTTTC CGCGCGATGA AGAGGGCGAC
TCGCTGTTCG AGCACGTCAT GCGCCGCCGC CGTTCGCTGG ACGTGATGTG GCCGGTGCAA
ACCGCGAAAC AGTCGGTGCT GGTGAACCTG ATGCCGGCCA CCGACACGAC CGGTATCGAC
GGTTATCTCG CGCGGATCGA AGCCAGCCTG ACGGCCCAGT TCAACACCGA TCTGGAACGC
GCGCGCGTCG GCGTTCATAC GCTCCACCTC GAAGGCGACG AGCCGGGTGC GGCGCTGATG
CGTCTTCTCA AACGAAGCGG CCTCGATGTC TAA
|
|---|
| Protein sequence | MNTAAVENNP GASKPRHAHP FGNLGRVRRL LAPAVARPFA IVETVVLVLV VLAVAHWLHP
EDPLLLHNGF PWLWLASLLV ALRYGSLLGL LSGALMLGAW ALFYPHGGPF PTLYFAGGLI
QTILAGHFGD TWGSRAERAS SLNDYLNDRL VALTNSHYLM RLSHERLEKD LLSRPTTLRD
SITELRRLSV ATDTALAAPA TGKENDPLGG ASGLLEFVAQ ACQIEVAALY PVHHGKLGTQ
AIAQIGDPFE FAAHDELVTH ALNTLSVAHL KNEDTVVPVS QYLVCAPLVS ADGELRALLV
VKRMPFLSLN FDNLQLLLVL LGYYADGVEH SAFVQRILDR VPNCPYEFAL DLSRLTRLQQ
KAGVASSLVA LAFPRDEEGD SLFEHVMRRR RSLDVMWPVQ TAKQSVLVNL MPATDTTGID
GYLARIEASL TAQFNTDLER ARVGVHTLHL EGDEPGAALM RLLKRSGLDV
|
|---|
| |