| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1492 |
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| Symbol | |
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| ID | 6280777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1671380 |
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| End bp | 1675363 |
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| Gene Length | 3984 bp |
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| Protein Length | 1327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621057 |
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| Product | putative signal peptide protein, TPR domain-containing |
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| Protein accession | YP_001895130 |
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| Protein GI | 187923488 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGATA ACCGCCCTCG CATCGCGCCC ACGTGGCTCG TCCTGCTGCT CGCGGGCGTC
GTGTTGATCA CGCTCTATCT CGTGCATCCG CGCGGCGGTC TGCGCAGCCG GATGACCTCG
ACCGACGCGC CGAGCGATCT CAGCATCGCG TATCTGGAAG CATGGCTGCG CGTGCAGCCC
GATAACTCGG AAATCCTCTC GGTGCTCGGC ACGCAGTACG TGCGTCTGGG CCGCAACGAG
GACGCGCGCC GTATTGCCGC CCGCATGGAG GCGATGCCGG ACGAGCACCT GCGCCGCGCG
GCGCAATTGC TGCGTCTGAG CGTCGACACG CGCGAGACGT TCGCGCTGCC CGCCAACGAT
CCGGGCCGCG AGGCCGCGCT TGACCGTTTG CGCACGCAGC TCACGAATGC GGCTGCGCTG
ACGTGGTCGA ATGCCGATCT GCAGATGCTG GCCGAGGCCG CGGCGTCGGT GAATGCGCAG
CAGCTCGCCG GGCAACTCTA CGCGCGCCTC GCGGTACAGG ACCCCGCGCA GCAAACGCGC
TGGAACCGCG AAGTGGTGCG CTTTGCCATG TATGGCGGCG ACTATCGTGG CGCGGCGAAC
GGCTGGTTCC GTTTGCAAGC CAGCGCGGCG ACGGTCGATG CGAGACGTCA GTGCTTTATC
GAAGGCATCA AGGCCTTGCA GTCGGGCAAT CTGCTCGACG AAGCGCTCGC TGCCGCCGAT
CAACACGGCG CCGAATTCAG GCACGATCAC GAAACGCTCG TGGTGCTGCT GAATCTGGCG
CGCGCGGCGC ATCGTCCGGA TCTCGTGGAC CGTTACGCGA AGGCGCTGGC CGGTTACGCG
CAGGCTCAGC CAGAAGAAGA CGGCGCGCTG CGCCTCGTCG ACTTTATCCG CGAGCGTGCA
AGCGAAGCGG GCACGCAGGG GCAGTACGCC TATATGGATG GTCCGCAAGT ACGGCCCGGT
CTTGCCGTGC GCGCGAGTAC CCATGGTTCG CGCGAGGTGC ATGTCGTGCG CGTCGCGGCG
TCCAGCGCTG CGCCTGCGTC CGTGAAACCC GCTGCTGCCG CGCCCGCCGC AACGGCATCA
GCCGCCGCGG CTGCGCCGGC CGCCGCCGCT GCCAACGACG TGCCGGGCCT CCTCTATCAG
TCGTTCCTCG AATCGAGCGA TCTGCCCAAC GCTCAGCGCG TGGCGGCCGA GCAGGTCAGC
AAGAACCCAG GTTCGCCGGT CTGGACCAAG CGCCTCGCTC AGGTCGCCGA ATGGAATCAC
GCGTCGCCGC TCGCTTTACA GATGTGGCTC GCCTACGCGC AAGCCACGCA CGATCCGGAA
GGCTGGAAAA ACGTGATGCG CCTCGCGCCG ATGCTCAACG ACGACAACGC CTATCTGGCC
GCGTTGATCC AGGCATCGAA TGCTTCGCCC GGCGACCTGA AGCTGGTCGA CTCCGTAGTC
GCGGCTTACG AACGCCTCGG CCGTCCTGAC GACGCGCTGG CGTTCCTGCG CGGCCGCCAG
CGCAATTCGC CGGCGGAAGC GATCGACGCG CGTCTGGGTC AGCTCGCCGA GCGCTCGGGT
CACGACGACG AAGCGCTGAG TTATTACCGC AAGCTGAACC AGCTTTATCC GTCGAACACG
CAATACGCGC TGCGCACGGC GAGCCTTCTG TATCGTCACG GCGACTACAA GGGCGCGCTC
GACACGCTGC TCGCCGCGCG CCGCGGCGCC AAGGACGACG ATGTGCTGTT CTGGCGCAAC
GCCGCGCAGC TCGCGCGCCT GCTGCAGCGT GACGATATCG CGAACGACGC CTACAAGCAT
CTGCTGGCAA GCGGCCAGGC GGCGCCTGAG GACCTGAGCG CGATGACGTA CTTCTACGAC
GCGTATCCGA TCGACGCAGC GCGCACGTCC GAATTGCAGT TCCGCCGTGA CCATTCGCAA
CGCGCGTTGC AAAGCGCGAT TCACTATTAC ACCGATGCCG AGCAATACGA TCGCGTCGAT
GAATTGCTGA AGAGCCTCAC GCCCGAGCAG CTGGCCGCGG GCGAAGCCGA CCCGGCATTC
CTGCGCGTGC GGGCCGAGTA CTATCGCCAG ATCGATCGTC CGCTCGATGC GTTGCGCGAT
TTGCAGCACG CGGTGTCGCT GCCCGGCGCG ACACTCGATT TGCGCGCCGC GCTGCTCTGG
ACGCTGGTGG ACTACGGCAG CGAAGCGCAA TTGCGCGAAG CAGTCGCCGA ATGGCGCGAT
GCGCCCGCTC AGGCACCGGC TTTGTGGGGT CCGCTGGCCG CCGCGCAGAT GCGTTTGAAC
CGGCCGGAAG CGGCGCTCAA GTATCTGCGC CTGCAGTCGG CGTCGATGTC GCGCGATCCG
CTGTGGCAAC TCGCCTACGC CGAAGCGCAG GAAATGGCGG GGCGCAGCGA TCTCGCCTGG
TCGATCCGCC GCAACGTCTG GCGTCAGATG CAGCAGGAAG AGGCCGAGAT TCGCGCCAAC
AGCGCGCAAG GCCAGATCGT GCTGCGCACG CGCGCCTCGC AGGGCGGCGA AGTGCGTGAG
CAGATGCTCG GCCGTCGCGT CACGCTTGCG TCGATCTTCG AAAACGCGGA CGTGTCGAAG
GCTTTCCTGA TCGATCTGCT CGCGAGCGAC GCGGGCCGCA ACGACAACGC CGATGCGCGC
CGCACGTTGC TCGGCGACGC GGCCGGCCTG CCGCCCGCGC AACCGGTGAA GGCACCCGCC
GCGGCGAAGT CGCCGGATCA GGCGCTGTTG AGTTCGTCGG TGGCGCGCGA CGTGGCGCTC
GCCTGGGCGA TGTCGCATGA AGCGAGTCCG CTGGCGAAGC GCTGGCTGGC CCGCCAGTAC
GCCAACGTGC TGGTGCAGCC GTCCGAGCAG CTGATCGCGA TCGCGCTCGC CGAAAACGAC
AAGCCCGCCA TGGAGCGTCT GCTCGACCAG CAAGGCGCAC GCTTGCCGCT CTACAACCGC
ATCGATGCTT CGATCGCGGT GGATCGTCCG GGCGCGGCGG AAAACCTCGC GTTCCAGGGC
CTGGAAGGCG CGCCCTACGA TTCGGAACTG CACAGCCGGC TGGAGCAAAC CGCGCTGACA
TGGCCGCAAT CGCTCGACGC GACCGTGACC AGCTTCGTCG AACATCCGCT CGACTATGTG
GAGCAGACGC TGGCGGGCAG CATCAAGGTC GCCGATCTCT ACATGATCGG CGTGAACGGT
GTCCAACGCT TTCAGCACTC GACGGACGAG TCGCAACTGA CCAACGTGCC TTCGGTGGAT
CGTTCGGTGG AGTTTTACGC GCGCCGTCAA ACCTACGACA CCGCCTTCAT GGTGACCGCC
GGCCGCCGCG AAGCGCTCGA CAGTTTCTAT AGCGTGTCGG TGGGCGCGGA GTGGGGCAGG
AACTCGCCGC TGTCGATCGC GCTGAAAGCG GGCCGCAATC AGACGGCGCG GGAATCGCAG
GCATTGCTGG TCGGCGGCAT GAAGGACAAC GTGGTCGGCA CGATCACGTA CCGCGCGACG
CAGCATCTGT ATGCGACGGG CACCGTCGAA GCCGATCGTT TCTATAGCCA GGCGCGCAAT
TACCTCGGCA GCGGCGTGCT CTCGACGGGT GAGATCGGCT ATCGGATCCG CACGAACTAT
CCGGACTACA CGGTGCGCCT GATCGGCGCG CATGGCGACT ACGGCGCGAG CGGCTCCGCG
GACGGCCTGA TTTCGCGGCT GATTCCGGCG AGCGCCGGGC CGGCCGACGC ATCGACCTTC
GTTCCGCAAA CCTATTCGCA ATACGGGCTG TTCTTCGGTT TCGGCAACGA TCTGATCGAC
CAGTACACGC GCGCATGGCG CCCGTTCCTC GACGTGGGCG TGCTGCACGA CTCGTTCCAG
GGCTGGGGGC CGTCGATCAG TCTGGGCCTC GCGGGCACGG TGTTCGGCGG CGATCACGCG
GCACTCTTTT TCTCGCATCA GCGCGTCTCG CGTCTCGGCA CGCCAGTGAC CCAGATCGGC
GCGCGCTATA GCTGGTTTTA TTGA
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| Protein sequence | MVDNRPRIAP TWLVLLLAGV VLITLYLVHP RGGLRSRMTS TDAPSDLSIA YLEAWLRVQP
DNSEILSVLG TQYVRLGRNE DARRIAARME AMPDEHLRRA AQLLRLSVDT RETFALPAND
PGREAALDRL RTQLTNAAAL TWSNADLQML AEAAASVNAQ QLAGQLYARL AVQDPAQQTR
WNREVVRFAM YGGDYRGAAN GWFRLQASAA TVDARRQCFI EGIKALQSGN LLDEALAAAD
QHGAEFRHDH ETLVVLLNLA RAAHRPDLVD RYAKALAGYA QAQPEEDGAL RLVDFIRERA
SEAGTQGQYA YMDGPQVRPG LAVRASTHGS REVHVVRVAA SSAAPASVKP AAAAPAATAS
AAAAAPAAAA ANDVPGLLYQ SFLESSDLPN AQRVAAEQVS KNPGSPVWTK RLAQVAEWNH
ASPLALQMWL AYAQATHDPE GWKNVMRLAP MLNDDNAYLA ALIQASNASP GDLKLVDSVV
AAYERLGRPD DALAFLRGRQ RNSPAEAIDA RLGQLAERSG HDDEALSYYR KLNQLYPSNT
QYALRTASLL YRHGDYKGAL DTLLAARRGA KDDDVLFWRN AAQLARLLQR DDIANDAYKH
LLASGQAAPE DLSAMTYFYD AYPIDAARTS ELQFRRDHSQ RALQSAIHYY TDAEQYDRVD
ELLKSLTPEQ LAAGEADPAF LRVRAEYYRQ IDRPLDALRD LQHAVSLPGA TLDLRAALLW
TLVDYGSEAQ LREAVAEWRD APAQAPALWG PLAAAQMRLN RPEAALKYLR LQSASMSRDP
LWQLAYAEAQ EMAGRSDLAW SIRRNVWRQM QQEEAEIRAN SAQGQIVLRT RASQGGEVRE
QMLGRRVTLA SIFENADVSK AFLIDLLASD AGRNDNADAR RTLLGDAAGL PPAQPVKAPA
AAKSPDQALL SSSVARDVAL AWAMSHEASP LAKRWLARQY ANVLVQPSEQ LIAIALAEND
KPAMERLLDQ QGARLPLYNR IDASIAVDRP GAAENLAFQG LEGAPYDSEL HSRLEQTALT
WPQSLDATVT SFVEHPLDYV EQTLAGSIKV ADLYMIGVNG VQRFQHSTDE SQLTNVPSVD
RSVEFYARRQ TYDTAFMVTA GRREALDSFY SVSVGAEWGR NSPLSIALKA GRNQTARESQ
ALLVGGMKDN VVGTITYRAT QHLYATGTVE ADRFYSQARN YLGSGVLSTG EIGYRIRTNY
PDYTVRLIGA HGDYGASGSA DGLISRLIPA SAGPADASTF VPQTYSQYGL FFGFGNDLID
QYTRAWRPFL DVGVLHDSFQ GWGPSISLGL AGTVFGGDHA ALFFSHQRVS RLGTPVTQIG
ARYSWFY
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